DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PRE2

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_015428.1 Gene:PRE2 / 856218 SGDID:S000006307 Length:287 Species:Saccharomyces cerevisiae


Alignment Length:126 Identity:24/126 - (19%)
Similarity:56/126 - (44%) Gaps:12/126 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VRKGSTAVGVRGANCVVLGVE-KSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQV 91
            :..|:|.:..|....:::.|: :::.......:||:|:..::..:....||..||.:........
Yeast    72 IAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGS 136

  Fly    92 ECQSHRLNFENQVTLEYITRYLAQLKQKYTQ---------CNGRRPFGISCLIGGIDADGS 143
            :|:.|.|..:.::::...::.|:.|..:|..         |...|..|.:  |..:|:||:
Yeast   137 QCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPT--IYYVDSDGT 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 24/126 (19%)
PRE2NP_015428.1 proteasome_beta_type_5 76..264 CDD:239730 23/122 (19%)

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