DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psmb3

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001123295.1 Gene:psmb3 / 573095 ZFINID:ZDB-GENE-040426-2682 Length:205 Species:Danio rerio


Alignment Length:120 Identity:28/120 - (23%)
Similarity:47/120 - (39%) Gaps:25/120 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGANCVVLGVEKSSVSEMQEDRT-VRKISMLDRHVALAFAGLTADARILINRGQVECQ 94
            |...:.:||..||.:..::....:.|...| .:||..:...:.:..|||..|         |:..
Zfish     8 GGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATD---------VQTV 63

  Fly    95 SHRLNFENQVTLEYITRYLAQLKQK----------YTQCNGRRPFGISCLIGGID 139
            |.||.|...:   |..:...|:|.:          |.:..|  |:.|..:|.|:|
Zfish    64 SQRLKFRLNL---YELKEGRQIKPRTFMSMVSNLLYERRFG--PYYIEPVIAGLD 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 28/120 (23%)
psmb3NP_001123295.1 proteasome_beta_type_3 6..201 CDD:239728 28/120 (23%)

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