DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psma3

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001011257.1 Gene:psma3 / 496707 XenbaseID:XB-GENE-976787 Length:255 Species:Xenopus tropicalis


Alignment Length:246 Identity:84/246 - (34%)
Similarity:131/246 - (53%) Gaps:19/246 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDR 69
            |..:.:.|||||.:.|||||.:||...|||:|:|..:.||.||||..:|::.|:.:.::|..:||
 Frog     8 YDLSASTFSPDGRVFQVEYAAKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNVDR 72

  Fly    70 HVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCL 134
            ||.:|.|||.||||.|.:..:.|..:.|.|:...:.|::::..:|.....||..:..||||.|.:
 Frog    73 HVGMAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSFM 137

  Fly   135 IGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALL- 198
            :|..:.|..|:|:..:||||.:.|...|.|:.....:...||... .::|.: |.:|...:.:. 
 Frog   138 LGSYNEDDGAQLYMVDPSGISYGYWGCAIGKAKQAAKTEIEKLQM-KDMTCR-DVVKEVAKIIYI 200

  Fly   199 ---EVTQMS-QMRLE-VAVLENGKPMKMLDSVVISEIV-KIVQNEKELQAK 243
               ||...| ::.|. |..:.|||          .||| |.::.|.|..||
 Frog   201 VHDEVKDKSFELELSWVGKITNGK----------HEIVPKDIREEAEKYAK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 73/213 (34%)
psma3NP_001011257.1 proteasome_alpha_type_3 5..217 CDD:239720 72/210 (34%)

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