DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psma4

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001007998.1 Gene:psma4 / 493360 XenbaseID:XB-GENE-5837209 Length:261 Species:Xenopus tropicalis


Alignment Length:256 Identity:83/256 - (32%)
Similarity:146/256 - (57%) Gaps:11/256 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTV-RKI 64
            ||.||....|||||:|.|.|||||.||:....|.:|:...:.|:|..|:.::.::.::... .||
 Frog     1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKI 65

  Fly    65 SMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPF 129
            ..|:..:|.:.||:|:||.:|.|..::..|.:.|.::..:..|.:...|..:||.|||..|:|||
 Frog    66 YKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPF 130

  Fly   130 GISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAM 194
            |:|.|..|.|.....:|:.::|||.:..:|||..|..:.......::.|.:.::|.| .|:.||:
 Frog   131 GVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGDMTLK-SALALAV 194

  Fly   195 RAL---LEVTQMSQMRLEVAVL--ENGK-PMKMLDSVVISEIVKIVQNEKELQAKAHKMKR 249
            :.|   ::|:::|..::|:|.|  |||| .:::|....:.|::|:.:.|   :||..:.|:
 Frog   195 KVLNKTMDVSKLSAEKVEIATLTRENGKTKIRVLKQKEVEELIKLHEEE---EAKIEREKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 68/211 (32%)
psma4NP_001007998.1 proteasome_alpha_type_4 3..216 CDD:239721 69/213 (32%)

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