DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psmb2

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001002609.1 Gene:psmb2 / 436882 ZFINID:ZDB-GENE-040718-353 Length:199 Species:Danio rerio


Alignment Length:219 Identity:38/219 - (17%)
Similarity:79/219 - (36%) Gaps:39/219 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VGVRGANCVVL---GVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSH 96
            :|::|.:.|::   .|..||:.:|:.|  ..|:..|...:.|...|...|........|...|.:
Zfish     5 IGIQGPDFVLVAADNVAASSIIQMKHD--YDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLY 67

  Fly    97 RL------------NFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHT 149
            ::            ||..:...:|:              ..|.|:.::.|:.|.|......|::.
Zfish    68 KMRNGYELSPAAAANFTRKNLADYL--------------RSRTPYHVNLLLAGYDETDGPGLYYM 118

  Fly   150 EPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEVAVLE 214
            :......:....|.|..|.......::.|...  .|:.:|:.|..:.|.|:.:...:.|.     
Zfish   119 DYLSALAKAPFAAHGYGAFLTLSILDRYYRPD--LTREEAVDLLKKCLEELNKRFILNLP----- 176

  Fly   215 NGKPMKMLDSVVISEIVKIVQNEK 238
             ...::::|...|.::.|:....|
Zfish   177 -SFTVRLIDKDGIHDMEKLPVGRK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 34/192 (18%)
psmb2NP_001002609.1 proteasome_beta_type_2 1..192 CDD:239727 36/210 (17%)

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