DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and pas-3

DIOPT Version :8

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_491520.2 Gene:pas-3 / 172139 WormBaseID:WBGene00003924 Length:250 Species:Caenorhabditis elegans

Alignment Length:254 Identity:78/255 (31%)
Similarity:139/255 (55%) Gaps:10/255 (4%)


  Fly     1 MSSRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTV-RKI 64
            |:.||....|||||:|.|.|||||.||:....|.:|:..:..:|:..|:.:|.::.:|..: .|:
 Worm     1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKV 65

  Fly    65 SMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPF 129
            ..|..:::...||:||||.||||..:....|:|.::..::.:|.:.:.|...||:|||..|:|||
 Worm    66 YRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPF 130

  Fly   130 GISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAM 194
            |:|.|..|.|.....:|:.::|||.:..:|||..|..........::.|....:.   :|.:||:
 Worm   131 GVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLE---EAKQLAI 192

  Fly   195 RAL---LEVTQMSQMRLEVAVLENGKPMKMLDSVVISEIVKIV--QNEKELQAKAHKMK 248
            :.|   |:| :::..::|:|||.......:|:.:...|:..::  ..:||.:|:..:.|
 Worm   193 KVLWKTLDV-KLASEKVEMAVLTRRDGKTVLEELTTKEVDALIAEHEKKEKEAETAEKK 250

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 73/240 (30%)
proteasome_alpha_type_7 5..213 CDD:239724 69/212 (33%)
pas-3NP_491520.2 PTZ00246 1..234 CDD:173491 74/237 (31%)
proteasome_alpha_type_4 3..213 CDD:239721 70/214 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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