DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and htr1ab

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001139238.1 Gene:htr1ab / 797538 ZFINID:ZDB-GENE-090409-2 Length:403 Species:Danio rerio


Alignment Length:506 Identity:148/506 - (29%)
Similarity:224/506 - (44%) Gaps:142/506 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 LQLAVPEWEALLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLP 164
            |.:.||....:.|:|::..:|:.:|.||..|:.::...:.|:.|.|:.|.||||.||.|::||||
Zfish    26 LPVKVPLSYQISTSLLIGALILCSIFGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLP 90

  Fly   165 FNVAYSILGRWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLL 229
            ....|.:|.:|..|...|.::::.|:||||||||:||||||||||||||||:|.:|||:.|..||
Zfish    91 MAALYQVLDKWTLGQVTCDIFISLDILCCTSSILHLCAIALDRYWAITDPIDYMKKRTLKRAALL 155

  Fly   230 ISGVWLLSLLISSPPLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMTIVYIEIFV 294
            |:..|.:...||.||::.....|      ..|.::....|.|||:..:|:|||.:|.::|..||.
Zfish   156 ITVTWFVGFSISIPPMLIMKSQP------KTCMISHDPWYTIYSTFCAFYIPLILMLVLYGRIFK 214

  Fly   295 ATRRRLRERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQ 359
            |.|.|:|:..|                                                      
Zfish   215 AARFRIRKTVR------------------------------------------------------ 225

  Fly   360 NDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQSSSTC 424
                       :|:                      ||..:..|.......:..|.......|..
Zfish   226 -----------KPE----------------------KKRVKCLTVSPALFKRANGELSKNWKSAV 257

  Fly   425 EPHGEQQLLPAGGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKLTPPQ 489
            ||                                      .|..|:...:..|::..||::....
Zfish   258 EP--------------------------------------KPAACVNGAIKHAEDGESLEIIEVH 284

  Fly   490 SSTGVAAVSVTPLQKKTSGVNQF-------IEEKQKISLSKERRAARTLGIIMGVFVICWLPFFL 547
            |:    :.:..||....:.|..|       .|.|:|::|::||:..:|||||||.|::||||||:
Zfish   285 SN----SKNNLPLPNTPNSVPLFENKHEKNTEAKRKLALARERKTVKTLGIIMGTFILCWLPFFI 345

  Fly   548 MYVILPFCQTCCPTNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            ..:::|||.||......::.|.||||.||.|||:||..||.|::.|||:::
Zfish   346 KALVMPFCPTCVMPLWLQDVINWLGYSNSLLNPIIYAYFNKDFQSAFKKII 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 78/183 (43%)
TM helix 1 111..137 CDD:320188 7/25 (28%)
TM helix 2 144..170 CDD:320188 13/25 (52%)
TM helix 3 182..212 CDD:320188 21/29 (72%)
TM helix 4 224..247 CDD:320188 9/22 (41%)
TM helix 5 266..294 CDD:320188 11/27 (41%)
7tm_GPCRs <519..594 CDD:475119 37/74 (50%)
TM helix 6 528..550 CDD:410628 14/21 (67%)
TM helix 7 562..587 CDD:410628 12/24 (50%)
htr1abNP_001139238.1 7tm_GPCRs 36..392 CDD:475119 142/490 (29%)
TM helix 1 38..62 CDD:320453 7/23 (30%)
TM helix 2 71..93 CDD:320453 13/21 (62%)
TM helix 3 109..131 CDD:320453 13/21 (62%)
TM helix 4 154..170 CDD:320453 6/15 (40%)
TM helix 5 187..210 CDD:320453 9/22 (41%)
TM helix 6 326..348 CDD:320453 14/21 (67%)
TM helix 7 360..385 CDD:320453 12/24 (50%)

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