DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oct-TyrR and Oamb

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:644 Identity:188/644 - (29%)
Similarity:252/644 - (39%) Gaps:191/644 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ECEGAVEELHASILGLQLAVPEWEA---LLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNF 146
            |||..::.:            :|..   |::..||..|.||.|.||.|||.:||....||.|.||
  Fly     5 ECEDLIKSV------------KWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNF 57

  Fly   147 FIVSLAVADLTVALLVLPFNVAYSILGRWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAI 211
            |||:||||||.|.|.||||:..:.:...|.||...|::||..||..||:||||||||:||||.|:
  Fly    58 FIVNLAVADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAV 122

  Fly   212 TDPINYAQKRTVGRVLLLISGVWLLSLLISSPPLIGWNDW------------------------- 251
            |.|:.|....:..:...||:|:|:||..|..|||:||.|.                         
  Fly   123 TRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSE 187

  Fly   252 ----------------------------------------------------------------- 251
                                                                             
  Fly   188 DGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTT 252

  Fly   252 -----------------------PDEFTSATP--CELTSQRGYVIYSSLGSFFIPLAIMTIVYIE 291
                                   |...:.:.|  ||||:.||||:||:||||:||:.:|...|..
  Fly   253 ASSSSTTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWR 317

  Fly   292 IFVATRRRLRERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATP 356
            |:       |...|..:......|:|:          .:...||:.......|...|.|.     
  Fly   318 IY-------RAAVRTTRAINQGFKTTK----------GSKGIGSRFEEQRLTLRIHRGRG----- 360

  Fly   357 MIQNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVK-KSRRAKTKDSIKHGKTRGGRKSQS 420
              .|.|:|:.|   .....|.....|...|::     |.| .:||....|.||            
  Fly   361 --SNQQDSMHS---NGSTQSTTTTLGTPSPER-----LSKYATRRLHHHDKIK------------ 403

  Fly   421 SSTCEPHGEQQLLPAG-GDGGSCQPGGG------HSGG--GKSDAEISTESGSDPKGCIQVCVTQ 476
            .|...|..|.....|| ||.|..:...|      |..|  |:...|..........|....|..|
  Fly   404 ISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQ 468

  Fly   477 ADEQTSLKLTPPQSSTGVAAVS--VTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFV 539
            ..:... :|...||:|..|..|  ..|..||....|...:.|:   ...|.:||:||.||:|:|:
  Fly   469 VGKGLP-ELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKR---FRMETKAAKTLAIIVGMFI 529

  Fly   540 ICWLPFFLMYVILPFCQTCCPTNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            .||.|||.||:|.||||.|.....| :.:.||||.||.:||:||.:|:.|:|.||||::
  Fly   530 FCWCPFFTMYIIRPFCQDCVDPLLF-SVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 94/298 (32%)
TM helix 1 111..137 CDD:320188 13/25 (52%)
TM helix 2 144..170 CDD:320188 17/25 (68%)
TM helix 3 182..212 CDD:320188 20/29 (69%)
TM helix 4 224..247 CDD:320188 10/22 (45%)
TM helix 5 266..294 CDD:320188 15/27 (56%)
7tm_GPCRs <519..594 CDD:475119 36/74 (49%)
TM helix 6 528..550 CDD:410628 13/21 (62%)
TM helix 7 562..587 CDD:410628 11/24 (46%)
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 180/610 (30%)
TM helix 1 22..48 CDD:320191 13/25 (52%)
TM helix 2 55..81 CDD:320191 17/25 (68%)
TM helix 3 93..123 CDD:320191 20/29 (69%)
TM helix 4 135..158 CDD:320191 10/22 (45%)
TM helix 5 292..321 CDD:320191 15/35 (43%)
TM helix 6 512..542 CDD:320191 16/29 (55%)
TM helix 7 551..576 CDD:320191 11/25 (44%)

Return to query results.
Submit another query.