DRSC/TRiP Functional Genomics Resources

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Protein Alignment Septin2 and Septin1

DIOPT Version :10

Sequence 1:NP_524417.1 Gene:Septin2 / 42438 FlyBaseID:FBgn0014029 Length:419 Species:Drosophila melanogaster
Sequence 2:XP_063142351.1 Gene:Septin1 / 293507 RGDID:1307216 Length:460 Species:Rattus norvegicus


Alignment Length:342 Identity:143/342 - (41%)
Similarity:212/342 - (61%) Gaps:20/342 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HVGFDSLPDQLVNKSVQNGFVFNVMCIGETGLGKSTLMDTLFNTS-FESTPSP----HTLPSVKL 82
            :|||.:||:||..|||:.||.|.:|..||:|||||||:::||.|: :|....|    .|..::.:
  Rat     5 YVGFAALPNQLHRKSVKKGFDFTLMVAGESGLGKSTLINSLFLTNLYEDRQVPDASARTTQTLTI 69

  Fly    83 KAHTYELQESNVRLKLTICDTVGYGDQINKDDSFKAVVDYIDAQFENYLQEELKIKRSLVTCHDS 147
            :....|::|..:::|||:.||.|:||.::..|.:..||.:|:.|||.||::|..:.|..:  .||
  Rat    70 ERRGVEIEEGGIKVKLTLVDTPGFGDSVDCSDCWLPVVRFIEEQFEQYLRDESGLNRKNI--QDS 132

  Fly   148 RIHICLYFICPTGHGLKSLDLVCMKKLDSKVNIIPVIAKADTISKVELQRFKAKIIQELNANGVH 212
            |:|.|||||.|.|.||:.||:..::.:..||||||||.|||.:...|.|..|.||..:|....::
  Rat   133 RVHCCLYFISPFGRGLRPLDVAFLRAVHEKVNIIPVIGKADALLPRETQVLKQKIRDQLKEEEIN 197

  Fly   213 IYQFP----TDDETVAETNTSMNSHIPFAVVGSTEFIKVGNKLIRARQYPWGTVQVENETHCDFV 273
            |||||    .:||...:.|..|..:||||||||:|.::.|.:.:|.|:|.||||:|||..||||:
  Rat   198 IYQFPECDSDEDEEFKKQNEEMKENIPFAVVGSSEVVREGTRPVRGRRYSWGTVEVENPHHCDFL 262

  Fly   274 KLREMLIRTNMEDMREKTHTRHYELYRQKRLEQM---GFSDVDSDNKPISFQQTFEAKRSN-HLA 334
            .||.||::|:::|::|.||...||.||.:.|:.:   |..|..|.:| :|.|...|..... .||
  Rat   263 NLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQSLARPGARDRASRSK-LSRQSATEIPLPMLPLA 326

  Fly   335 E----LQSKEEEVRQMF 347
            :    ::.|:|||.:.|
  Rat   327 DTEKLIREKDEEVSKHF 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Septin2NP_524417.1 CDC_Septin 40..308 CDD:206649 119/279 (43%)
PTZ00121 <285..393 CDD:173412 23/71 (32%)
Septin1XP_063142351.1 None

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