DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and ZNF90

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_009069.1 Gene:ZNF90 / 7643 HGNCID:13165 Length:601 Species:Homo sapiens


Alignment Length:432 Identity:125/432 - (28%)
Similarity:177/432 - (40%) Gaps:120/432 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SEEEVVVDDPRKKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHT 193
            |....:.|..:|..:|..|...|.|.:||..|.||||.|...||:.|.|||.:.|.||:|.:|||
Human   160 SNRHKIRDTGKKPFKCIECGKAFNQSSTLATHKKIHTGEITCKCEECGKAFNRSSHLTSHKRIHT 224

  Fly   194 GEKPFTCNICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHR-----KSQMHQAYQ 253
            |||.:.|..|.|:.:..|||..|.:.|                 ||..:::     |...:.:..
Human   225 GEKRYKCEDCGKELKYSSTLTAHKRIH-----------------TGEKRYKCEDCGKELKYSSTL 272

  Fly   254 QQHQRVQISKTLYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKS 318
            ..|:|:...:                ||::|..|.|.|...|.|:.|:.:|.:.||||||.|.|:
Human   273 TAHKRIHTGE----------------KPYKCDKCGRAFISSSILYVHKISHTEEKPYKCEECGKA 321

  Fly   319 FSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATV 383
            |...:.|:.||:||||:|||.|..|...||:...|..|.:.||               |......
Human   322 FKLSSILSTHKRIHTGEKPYKCEECGKAFRRSLVLRTHKRIHT---------------GEKPYKC 371

  Fly   384 DHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANTKVEHF 448
            |..       |...::|.||..:                                     |:.| 
Human   372 DKC-------GKAFISSSLLYKH-------------------------------------KISH- 391

  Fly   449 QAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVNF 513
                                  :..:|:.|..|.:.|.:.|||..|..:||.||||||:.|:..|
Human   392 ----------------------SEKKPYKCEECGKAFKRSSTLTIHKISHTEEKPYKCQECDKVF 434

  Fly   514 RQVATLNNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVHT 555
            ::.:.|:.|..||:|||||.|..|.|.|::.|.|..|...||
Human   435 KRSSALSTHKIIHSGEKPYKCEECGKAFKRSSNLTTHKISHT 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 8/19 (42%)
zf-H2C2_2 157..181 CDD:463886 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 9/19 (47%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
zf-C2H2_8 281..366 CDD:464935 36/84 (43%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:463886 13/23 (57%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 13/23 (57%)
C2H2 Zn finger 534..554 CDD:275368 7/19 (37%)
ZNF90NP_009069.1 KRAB 4..62 CDD:214630
C2H2 Zn finger 175..195 CDD:275368 8/19 (42%)
COG5048 202..588 CDD:227381 110/390 (28%)
C2H2 Zn finger 203..223 CDD:275368 9/19 (47%)
C2H2 Zn finger 231..251 CDD:275368 7/19 (37%)
C2H2 Zn finger 259..279 CDD:275368 3/19 (16%)
C2H2 Zn finger 287..307 CDD:275368 7/19 (37%)
C2H2 Zn finger 315..335 CDD:275368 8/19 (42%)
C2H2 Zn finger 343..363 CDD:275368 6/19 (32%)
C2H2 Zn finger 371..391 CDD:275368 6/63 (10%)
C2H2 Zn finger 399..419 CDD:275368 7/19 (37%)
C2H2 Zn finger 427..447 CDD:275368 5/19 (26%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
C2H2 Zn finger 483..503 CDD:275368
C2H2 Zn finger 511..531 CDD:275368
C2H2 Zn finger 539..559 CDD:275368
C2H2 Zn finger 567..587 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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