DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and Zfp879

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001128072.1 Gene:Zfp879 / 497896 RGDID:1563273 Length:555 Species:Rattus norvegicus


Alignment Length:423 Identity:137/423 - (32%)
Similarity:204/423 - (48%) Gaps:70/423 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICA 204
            |..:|::|...|...::|..|.:|||.|:.|:||.|.|||.|.|:||.|:::||||||:.|:.|.
  Rat   194 KLYKCNICGKGFLHSSSLSKHQRIHTGEKLYQCKECRKAFSQSSSLTQHLRVHTGEKPYVCSECG 258

  Fly   205 KDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQ-----QQHQRVQISKT 264
            |.|...::||.|.:.|                 ||...:|..:..:.::     ..|||:...: 
  Rat   259 KAFSFTTSLIGHQRMH-----------------TGERPYRCKECGKTFKGSSSLNNHQRIHTGE- 305

  Fly   265 LYSGSYSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKSFSQLATLANHK 329
                           ||:.||||.|.|.|.|:|..|:|.|...|||:|..|.|:|:.::.|:.|.
  Rat   306 ---------------KPYTCSVCGRAFSQCSSLIQHQRIHTGEKPYECSQCGKAFTSISRLSRHH 355

  Fly   330 KIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPG 394
            :||||:||:.|:.|...|...|.|..|.:.||.: .|......|......:|.:.|         
  Rat   356 RIHTGEKPFHCNVCGKVFSYHSALIIHQRIHTGE-KPYACKECGKAFSQSSALIQH--------- 410

  Fly   395 TQQLTSGLLP---NNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSG 456
             |::.:|..|   :....:.:.|.:|:.|..:|                ...|..|.:..|....
  Rat   411 -QRIHTGEKPYKCDECGKAFSWISRLNIHHRIH----------------TGEKPYHCKECGKAFS 458

  Fly   457 RMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNN 521
            ..:.|.|..  |....::|:.||.|::.|:|.|.|:.|.:.||||||:.||:|...|||.::|..
  Rat   459 SHSAVNTHR--KIHTGEKPYKCSDCEKAFNQSSALIQHQRIHTGEKPFNCKVCGKAFRQSSSLMT 521

  Fly   522 HMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVH 554
            |.:||||||||.|..|.|.|.|.|:|.||.:.|
  Rat   522 HTRIHTGEKPYKCKTCGKAFSQSSSLANHQKTH 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
zf-H2C2_2 157..181 CDD:463886 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 11/19 (58%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
zf-C2H2_8 281..366 CDD:464935 36/84 (43%)
C2H2 Zn finger 284..304 CDD:275368 11/19 (58%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
zf-H2C2_2 325..349 CDD:463886 11/23 (48%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 8/19 (42%)
zf-H2C2_2 519..543 CDD:463886 14/23 (61%)
C2H2 Zn finger 534..554 CDD:275368 9/19 (47%)
Zfp879NP_001128072.1 KRAB 14..72 CDD:214630
COG5048 194..554 CDD:227381 136/421 (32%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..246 CDD:275368 11/19 (58%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
C2H2 Zn finger 282..302 CDD:275368 3/19 (16%)
C2H2 Zn finger 310..330 CDD:275368 11/19 (58%)
C2H2 Zn finger 338..358 CDD:275368 6/19 (32%)
C2H2 Zn finger 366..386 CDD:275368 6/19 (32%)
C2H2 Zn finger 394..414 CDD:275368 4/29 (14%)
C2H2 Zn finger 422..442 CDD:275368 3/19 (16%)
C2H2 Zn finger 450..470 CDD:275368 4/21 (19%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 8/19 (42%)
C2H2 Zn finger 534..554 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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