DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4360 and Zfp874b

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_006517346.1 Gene:Zfp874b / 408067 MGIID:3040702 Length:451 Species:Mus musculus


Alignment Length:437 Identity:117/437 - (26%)
Similarity:158/437 - (36%) Gaps:147/437 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 DDPRKKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTC 200
            |.|.|.|:||   ......::|..|.|.||||:.|||:.|.|.|.:.|.|.:|.||||||||:.|
Mouse   137 DKPYKCKECH---KTLSSRSSLLIHQKYHTDEKTYKCEKCGKRFLRSSHLQHHQKIHTGEKPYKC 198

  Fly   201 NICAKDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHR-----KSQMHQAYQQQHQRVQ 260
            ..|.|.|...|.|..|...|                 ||...::     .|..:.|..:||||:.
Mouse   199 EECDKAFLHHSYLRKHQAVH-----------------TGEKPYKCEECGNSFYYPAMLKQHQRIH 246

  Fly   261 ISKTL---------YSGSY---SSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCE 313
            ..:.|         :|.::   .....:.:.|.::|..|.:.|...|.|..|.|.|....|||||
Mouse   247 SGEKLDKCEECGKVFSSAFFLNQHKGIDSIEKRYKCQECGKSFCYRSYLREHYRRHSGEYPYKCE 311

  Fly   314 TCDKSFSQLATLANHKKIHTGDKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGA 378
            .|.|.||:.:.|..|:.||||.|||.|..|...|   |:.|:                       
Mouse   312 ECGKGFSRSSKLQEHQTIHTGVKPYKCEECEKCF---SSFTS----------------------- 350

  Fly   379 VTATVDHSMPAPLAPGTQQLTSGLLPNNLHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANT 443
                                                  |..|.::|                   
Mouse   351 --------------------------------------LKRHQIIH------------------- 358

  Fly   444 KVEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKI 508
                                       :.|.|..|..|.:.||..|.|..|.|.||.||||||:.
Mouse   359 ---------------------------SEDTPHECVECGKRFSSSSRLQEHQKIHTEEKPYKCEE 396

  Fly   509 CEVNFRQVATLNNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVHT 555
            |:..|...:.|..|..:||.||||.|..|.|.:...::|:.|..:|:
Mouse   397 CDKAFLYHSFLRRHRAVHTREKPYTCEECGKCYTSFTSLKRHQTIHS 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
zf-H2C2_2 157..181 CDD:463886 13/23 (57%)
C2H2 Zn finger 172..192 CDD:275368 8/19 (42%)
C2H2 Zn finger 200..220 CDD:275368 7/19 (37%)
zf-C2H2_8 281..366 CDD:464935 31/84 (37%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:463886 12/23 (52%)
C2H2 Zn finger 340..360 CDD:275368 5/19 (26%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 11/23 (48%)
C2H2 Zn finger 534..554 CDD:275368 5/19 (26%)
Zfp874bXP_006517346.1 KRAB 9..63 CDD:214630
C2H2 Zn finger 115..134 CDD:275368
C2H2 Zn finger 142..162 CDD:275368 6/22 (27%)
COG5048 <147..427 CDD:227381 107/406 (26%)
C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
C2H2 Zn finger 254..274 CDD:275368 1/19 (5%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
C2H2 Zn finger 310..330 CDD:275368 8/19 (42%)
C2H2 Zn finger 338..358 CDD:275368 7/83 (8%)
C2H2 Zn finger 366..386 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 422..442 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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