DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4360 and si:dkey-182i3.9

DIOPT Version :10

Sequence 1:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_009290015.1 Gene:si:dkey-182i3.9 / 103908689 ZFINID:ZDB-GENE-121214-310 Length:670 Species:Danio rerio


Alignment Length:436 Identity:126/436 - (28%)
Similarity:183/436 - (41%) Gaps:89/436 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KKKQCHVCKNKFRQLTTLRNHMKIHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICA 204
            ||..|..|...|   ..|:.|.::|.:.:|:.|..|.:.|....||..|.:|||||||::|..|.
Zfish   276 KKGTCKTCGKSF---ADLKMHERVHLEVKPFLCSICGRGFTVKGTLMEHQRIHTGEKPYSCETCG 337

  Fly   205 KDFRQQSTLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGS 269
            |.|.|...|.||:..|| .|.....||.:   :|...|| ..::||             .:::|.
Zfish   338 KQFAQTQNLTNHLLVHK-TEKPWKCSLCD---KTFKSKH-NMKLHQ-------------IVHTGE 384

  Fly   270 YSSPAAEELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTG 334
                      |...|.:|.::|...:.|..|...|...|.|.||.|.|.|.|...|..|..||..
Zfish   385 ----------KSHICHICGQKFGHGTNLKRHLLLHSGVKRYGCEICSKRFYQSIALKRHMAIHGA 439

  Fly   335 DKPYTCSYCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLT 399
            .||:.|..|...|.....|..||.||.::     ..|..|.|        .:.|..:...:.. |
Zfish   440 PKPFMCDICGKSFVFNFALQKHLLTHRNK-----TNGKSGTG--------KTFPCDMCEKSYS-T 490

  Fly   400 SGLLP--NNLHG------------STANIIQLDHHPLLHFLDGSTTVSSVVATAAANT------K 444
            :.||.  ..||.            |..::..|..|..|| |..|.....|.:.:..|.      :
Zfish   491 NALLKMHQRLHSEKDPYMCKVCGKSYVSVYSLRIHERLH-LGVSMWKCDVCSKSFCNKYGLKLHQ 554

  Fly   445 VEHFQAGGSPSGRMTVVGTINMLKGDNPDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKIC 509
            |.|                       ..::|:.||||.:.:.|..:|..||:.|:||||:|||.|
Zfish   555 VVH-----------------------TKEKPYECSVCGKTYGQPHSLKTHIRIHSGEKPHKCKTC 596

  Fly   510 EVNFRQVATLNNHMKIHTGEKPYNCSFCPKQFRQKSTLQNHLRVHT 555
            .::||....|:.|.:|||||:|::|..|.|:|.|.:.::.|:::||
Zfish   597 GMSFRLPGNLSRHKRIHTGERPFSCEVCGKRFVQHNHVKAHMQIHT 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 5/19 (26%)
zf-H2C2_2 157..181 CDD:463886 7/23 (30%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
C2H2 Zn finger 200..220 CDD:275368 8/19 (42%)
zf-C2H2_8 281..366 CDD:464935 28/84 (33%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
C2H2 Zn finger 312..332 CDD:275368 8/19 (42%)
zf-H2C2_2 325..349 CDD:463886 9/23 (39%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..526 CDD:275368 7/19 (37%)
zf-H2C2_2 519..543 CDD:463886 12/23 (52%)
C2H2 Zn finger 534..554 CDD:275368 6/19 (32%)
si:dkey-182i3.9XP_009290015.1 C2H2 Zn finger 280..297 CDD:275368 5/19 (26%)
C2H2 Zn finger 305..325 CDD:275368 6/19 (32%)
zf-H2C2_2 318..342 CDD:463886 13/23 (57%)
C2H2 Zn finger 333..353 CDD:275368 8/19 (42%)
COG5048 334..>649 CDD:227381 103/375 (27%)
C2H2 Zn finger 361..381 CDD:275368 7/36 (19%)
C2H2 Zn finger 389..409 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..437 CDD:275368 8/19 (42%)
C2H2 Zn finger 445..465 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368 3/20 (15%)
C2H2 Zn finger 509..529 CDD:275368 3/19 (16%)
C2H2 Zn finger 537..557 CDD:275368 3/19 (16%)
C2H2 Zn finger 565..585 CDD:275368 8/19 (42%)
C2H2 Zn finger 593..613 CDD:275368 7/19 (37%)
C2H2 Zn finger 621..641 CDD:275368 6/19 (32%)
C2H2 Zn finger 649..665 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.