DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orp8 and obr-4

DIOPT Version :10

Sequence 1:NP_001189250.2 Gene:Orp8 / 42412 FlyBaseID:FBgn0261550 Length:990 Species:Drosophila melanogaster
Sequence 2:NP_491691.1 Gene:obr-4 / 172253 WormBaseID:WBGene00016331 Length:676 Species:Caenorhabditis elegans


Alignment Length:700 Identity:210/700 - (30%)
Similarity:294/700 - (42%) Gaps:172/700 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 VRGTLKSWTKL-------WCVLKPGLLLIYKS-QKTKSSHWVGTVMLTSCQV-IERPSKK----- 296
            :.|.|..||.:       |..::...||.|.| :|.......|.:.||...| |:..:..     
 Worm     1 MEGPLSKWTNMVHGWQYRWFKIENDTLLYYTSREKMLKGQQRGQIRLTGAVVGIDGENNSLFTIT 65

  Fly   297 -DGFCFKLFHP--------------LEQSIWAPRG------------------------------ 316
             :|   |.||.              ||.||.|..|                              
 Worm    66 VEG---KTFHMQGRDLRERNQWVRILENSIRASSGYAKNVSVGTTPSQHFKQRTEEANEFLKTLV 127

  Fly   317 ----------------PDKETIGAVVQPLPTA------YLIFRAPSQAAGKCWMDALELSLRCSA 359
                            .:|:||.:::......      .:|:...:||       .|:.:::...
 Worm   128 EKVKALEQLKSGERAVDEKKTIDSLIAASNNLTNNVKHAIIYLQMAQA-------RLDPNMKTEK 185

  Fly   360 LLL---------RSNSSTGTAPTSSYIGEPLPVS-----------HETQWSEADYEKHFNDHD-- 402
            |:.         .|..:.||...|:......|:|           ....::.:| |:.|.|.|  
 Worm   186 LMFTHPDLNEKPSSRETPGTVSDSTQTSTDKPISGIQHLDHLKPQRAESYASSD-EEEFYDADEE 249

  Fly   403 -LDADSQNEAPNAVMSGLESESESDPAEPAQDDVVDQQCVETSYVPFTEEEFGEQGEQVEEL--- 463
             :|.|:.....:...|| :|...||.|..:.|        |..|      :||:..|..:|:   
 Worm   250 LIDLDNFESEKSGQESG-DSNRTSDAAIMSSD--------EDGY------DFGDSNEDFDEIYNN 299

  Fly   464 AEENK---------SLIWCIVKQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHADLLSKAVQE 519
            |||:.         |::..::.||..||||:||.|||||||.||.|:..:|.:.|.||.......
 Worm   300 AEEHDIGNVQQDHGSVLMHLLSQVSVGMDLTKVTLPTFILERRSLLEMYADFFAHPDLFIATNGN 364

  Fly   520 DDAFTRMKLVVQWYLSSFY--KKPKGLKKPYNPILGERFRCYWQHP----SGSRT---------- 568
            |.|..||..||::||:|||  :|....|||||.||||.|||.:..|    ||.:|          
 Worm   365 DSAEKRMIAVVRYYLNSFYAARKSGVAKKPYNAILGETFRCRYSVPNSSLSGKKTESGPWPGSDE 429

  Fly   569 ---FYIAEQVSHHPPVSAFYVTNREDGFSITCSILAKSKFYGNSTSAVLEGAATMTLLPRG-ECY 629
               .:||||||||||:||||.....:|.|....|..||.|.|.|......|...:||...| |.|
 Worm   430 KQLTFIAEQVSHHPPISAFYAEMPSEGISFNAHIYTKSSFLGLSIGVASIGEGILTLHNYGDEQY 494

  Fly   630 TATTPYAHCKGILMGTLSMELGGKINIECENTGYRTELEFKLKPFLGGADATNVVVGKI--KLGK 692
            |.|.|..:.:.| |.|...|.|||:.:|||.||||.::||..|||.||  ..:.:.|.|  ...|
 Worm   495 TITFPSGYGRSI-MSTPWFEFGGKVKVECEKTGYRADIEFLTKPFFGG--KPHRIQGSICRDGAK 556

  Fly   693 ETLATINGHWDKECRVKDSKTGEETVLFKVDAETRSKRLTRYMVPLDLQEANESQRLWQRVSEAI 757
            :.:.|:.|.|:.....| ::.|||.|...|.|:...|   :..||:..|...||:|||:.|:.|:
 Worm   557 KPVLTLRGEWNGTMYAK-TQNGEEYVFVDVKAKPEVK---KECVPVMQQGKRESRRLWRHVTAAL 617

  Fly   758 ANEDQVAATEEKTVLEERQRADAKERLSSDSVHMPDLFE-LDSYGQWLYK 806
            .......||..|..:|:|||.:|||||.|.....|.||: .|..|:|:||
 Worm   618 LRNRIQTATTSKRFIEQRQRKEAKERLESGEKWTPLLFDTTDKDGEWMYK 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orp8NP_001189250.2 PH_OPR5_ORP8 231..361 CDD:270103 32/195 (16%)
Oxysterol_BP 471..817 CDD:460126 146/358 (41%)
obr-4NP_491691.1 PH_ORP9 1..100 CDD:241444 25/101 (25%)
Oxysterol_BP 318..669 CDD:460126 146/356 (41%)

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