DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP92B and Fam13a

DIOPT Version :10

Sequence 1:NP_650844.1 Gene:RhoGAP92B / 42371 FlyBaseID:FBgn0038747 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_705802.1 Gene:Fam13a / 58909 MGIID:1889842 Length:693 Species:Mus musculus


Alignment Length:694 Identity:124/694 - (17%)
Similarity:216/694 - (31%) Gaps:278/694 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 EIQEIST----LKRNVSRTLQEYT-SLKRSHEAAIRLEEPA-AKVNHIKSQQEECELKLEKERDA 193
            ::..:||    |:|.:...::|:. .:..:.:.:....||. :..:.|.::|...:.|  |:.|.
Mouse    29 QVSNVSTTGELLERTIRSAVEEHLFDVSNAGDQSSEDSEPGPSSASSIPTRQRGHQFK--KQDDV 91

  Fly   194 WAAQMLELIAKED------EIVSCIR-------------DYVLNQRNYHERALQHVNASLARIQD 239
            |.....|||.||:      ....||.             ||| .:|:..:|  |..::.||::.|
Mouse    92 WHGCDKELINKENIPSGFSGCAECILNSQEAERFQDDICDYV-GERSKPKR--QKSSSRLAKLSD 153

  Fly   240 TIQGTEKSRFGTSLKEHLTSTNREISYIVELCCCCLLEHGLEEEGLLRVGCASTKLRRMKHALEA 304
            ...|.......:|::...|                     ||.|....:...|.::.|  ...:.
Mouse   154 NHDGALSMESLSSMQSQET---------------------LEPEAAEPLSSESKEIER--GGRDT 195

  Fly   305 QHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRIAERHSEAERKTEIKAILTKLP 369
            ||.:.|.                                  ::|.|..|.::.|           
Mouse   196 QHCENPT----------------------------------MKIQEHPSLSDTK----------- 215

  Fly   370 KENYANLRYLTRFLSIVQQRSALNKMSSQNLAIVMSPNMLWPRID-------KSSNAPADYIGQV 427
                             |||:...:...::..    |:|  |::|       |:...|       
Mouse   216 -----------------QQRNQDGEDQQESFV----PDM--PQLDLTALCDEKTWEEP------- 250

  Fly   428 NSSSAANIIVELLISQWDYFFIGEVEFYLTLQKQKLFVEGKSKSNSSNENLDRNDSEVMESPR-- 490
                         |..|........|..|:.|..:|.          ::.|| .||:.|.|||  
Mouse   251 -------------IPSWQPENADSDEARLSPQAGRLI----------HQFLD-EDSDPMLSPRFY 291

  Fly   491 -YGTLRRQKANA---PSPPTTNGNGIIMTTSQTSHRPHAKELFPQQ------------------- 532
             ||..|:...:.   ||||.::......::|..|:....::|.|.|                   
Mouse   292 AYGQSRQYLDDTEVPPSPPNSHSFMRRRSSSLGSYDDEQEDLTPVQLTRRIQTLKKKIRKFEDRF 356

  Fly   533 ------TPEKQEKPAKPPL----PNLPQFQSPAASQPTQTQLEPLPPPPVTPAKPVPMTRTQFFG 587
                  .|...:|.|.|.:    .:|.:|:........:...|.|          .|.||.:   
Mouse   357 EEERKYRPSHSDKAANPEVLKWTNDLAKFRKQLKESKLKISEEDL----------TPRTRQR--- 408

  Fly   588 LDNLPSPTADRKSTDSIGSFKLKPDVPQKPLLPK--RPTVLGVGVPKADGKSDDEGGTTPTQATI 650
            .:.||.         |.||...|.|..::.||.|  ||:|                     :||:
Mouse   409 SNTLPK---------SFGSQLEKEDEKKQELLDKAIRPSV---------------------EATL 443

  Fly   651 DNGNGSVRFKTEHFLDKLRQENGETNGTREVSSTTKENNHN---------------HDPPATAAD 700
                       |..|.||:::..|::...::...||:...|               |..|.|..:
Mouse   444 -----------EGILRKLQEKRVESSRPEDIKDMTKDQIANEKVALQKALLYYESIHGRPVTKTE 497

  Fly   701 QNQQQAQPQVTTPISPNSFQTPKR-----PTVPAPPPPTNWKSS 739
            :       |:..|:. :.::..|:     .|||....|::.:.|
Mouse   498 R-------QIMKPLY-DRYRLVKQILSRASTVPIIGSPSSKRRS 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP92BNP_650844.1 BAR 27..257 CDD:472257 31/146 (21%)
RhoGAP_nadrin 245..452 CDD:239851 25/213 (12%)
PRK13855 495..>650 CDD:172376 35/188 (19%)
Fam13aNP_705802.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..89 6/34 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..233 25/187 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..331 6/28 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..424 11/49 (22%)

Return to query results.
Submit another query.