DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ire1 and RAD53

DIOPT Version :10

Sequence 1:NP_001097839.1 Gene:Ire1 / 42358 FlyBaseID:FBgn0261984 Length:1074 Species:Drosophila melanogaster
Sequence 2:NP_015172.1 Gene:RAD53 / 855950 SGDID:S000006074 Length:821 Species:Saccharomyces cerevisiae


Alignment Length:790 Identity:160/790 - (20%)
Similarity:269/790 - (34%) Gaps:270/790 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 INDVLQEHAGIMLGHYNMPNEGNGNLQLSPTTASSKVVQSLATIHNYNDGYGLLANNEKNAADIG 423
            |:.:..:|..|:||.       :|||.|:..:.:...:.......|.|.   ||:..::....:|
Yeast    81 ISRLSNKHFQILLGE-------DGNLLLNDISTNGTWLNGQKVEKNSNQ---LLSQGDEITVGVG 135

  Fly   424 VQTDPELVEIGIDQRTNGNTINRTKTIILQNSNKVQAFINEWFMEHPSGKVHQILIVIVLGMIAL 488
            |::|                       ||    .:..|||:.|.:                    
Yeast   136 VESD-----------------------IL----SLVIFINDKFKQ-------------------- 153

  Fly   489 FWYTCSTMRELQKQSENGSKTFAIAQNGSNGSTGSNGSNANAEDLVDLGNGQVRVGKISFS-TNE 552
                |....::.:...|...|..||..|...||.|:        :|....|..:    .|| .:|
Yeast   154 ----CLEQNKVDRIRSNLKNTSKIASPGLTSSTASS--------MVANKTGIFK----DFSIIDE 202

  Fly   553 VLGKGCEGTFVFKG-------TFEERFVAVKRLLPECFTFADREVALLRESDAHENVVRYFCTEQ 610
            |:|:|...| |.|.       ||..:.::.::::.. .....||:.:|::.: |..:||.....:
Yeast   203 VVGQGAFAT-VKKAIERTTGKTFAVKIISKRKVIGN-MDGVTRELEVLQKLN-HPRIVRLKGFYE 264

  Fly   611 DRQFRYIAVE-LCAATLQDYTEG------DRSLELQNHIDVWQVLSQAASGLSHLHSLDIVHRDI 668
            |.:..|:.:| :....|.|:...      |...|:..         |..:.:.::||:.|.|||:
Yeast   265 DTESYYMVMEFVSGGDLMDFVAAHGAVGEDAGREISR---------QILTAIKYIHSMGISHRDL 320

  Fly   669 KPQNVLISLPDAKGKVRVMISDFGLCKKLNFGKTSFSRRSGVTGTDGWIAPEMMRSQRTTTA--- 730
            ||.|:||...|   .|.|.|:||||.|..  |..||.:.  ..||..::|||::|.:.|:.:   
Yeast   321 KPDNILIEQDD---PVLVKITDFGLAKVQ--GNGSFMKT--FCGTLAYVAPEVIRGKDTSVSPDE 378

  Fly   731 ----------VDIFSLGCVYYYVLSGGHHAFG----DNLKRQANILS-HEYNLAKLRPEDDSEDS 780
                      ||::|:||:.|.:|: ||..|.    |.|.:|....| ||..|...|..:::.| 
Yeast   379 YEERNEYSSLVDMWSMGCLVYVILT-GHLPFSGSTQDQLYKQIGRGSYHEGPLKDFRISEEARD- 441

  Fly   781 RIILAEQLISDMIHKDPQSRPPARCIGNHPLFWDEPKMLSFLQDVSDRVEKLQFHAEPLKSLEKN 845
                   .|..::..||.:|..|....|||  |                    ....||.|    
Yeast   442 -------FIDSLLQVDPNNRSTAAKALNHP--W--------------------IKMSPLGS---- 473

  Fly   846 GRIVVLDDWNVHLDPMITDDLRKYRGYMGASVRDLL---RALRNKKHHYHELTPAAQKMLGCIPH 907
                                 :.|..:...|:...|   :.|.|.....:|...|.:|:      
Yeast   474 ---------------------QSYGDFSQISLSQSLSQQKLLENMDDAQYEFVKAQRKL------ 511

  Fly   908 EFTNYWVDRFPQLISHAYHAFSICSNEPIFKPYYSAGYLFTRPWYFDADDALFPMLMLDPKPLPK 972
            :......::..:........|.|.::.||         .:|:|...:|:.....:|         
Yeast   512 QMEQQLQEQDQEDQDGKIQGFKIPAHAPI---------RYTQPKSIEAETREQKLL--------- 558

  Fly   973 IGSPKKTPSPASSQAQQLKQRKGLYNFRKPNDEL----PIPGVGLQRNLELDGQSLEP------- 1026
                      .|:..:.:|..|     :|.|...    |:|...:|.:||:. |.:.|       
Yeast   559 ----------HSNNTENVKSSK-----KKGNGRFLTLKPLPDSIIQESLEIQ-QGVNPFFIGRSE 607

  Fly  1027 -------DGKRDVFANFKFRR--------YSKP-------------------GNNRNYNGGHKEA 1057
                   |.:......|.|::        |..|                   .|||...|.....
Yeast   608 DCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNVSYLNNNRMIQGTKFLL 672

  Fly  1058 QDKEKY-VIW 1066
            ||.::. :||
Yeast   673 QDGDEIKIIW 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ire1NP_001097839.1 Luminal_IRE1 53..321 CDD:188875
STKc_IRE1 545..813 CDD:270884 82/300 (27%)
RNase_Ire1 817..941 CDD:199217 15/126 (12%)
RAD53NP_015172.1 FHA_RAD53-like_rpt1 35..148 CDD:438741 19/103 (18%)
STKc_Rad53_Cds1 196..465 CDD:271000 82/298 (28%)
FHA_RAD53-like_rpt2 577..695 CDD:438742 20/107 (19%)
Blue background indicates that the domain is not in the aligned region.

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