DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Naam and Isoc2b

Sequence 1:NP_001262738.1 Gene:Naam FlyBaseID:FBgn0051216 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_006228336.1 Gene:Isoc2b RGDID:1309062 Length:212 Species:Rattus norvegicus

Alignment Length:158 Identity:32/159 (20%)
Similarity:70/159 (44%) Gaps:32/159 (20%)


  Fly   204 SWGAELHKDLKVVD-------HGIKVYKGTNPEVDSYSVFWDNKKLSDTT------LNAQL-KMK 254
            |..|.:.|..:::|       |..:....|.||:.:..|    :.:|.|:      |..:| |:.
  Rat    41 SMAARMLKVARILDVPVLLTEHYPQGLGPTVPELGAQGV----RTMSKTSFSMVPPLQQELDKLP 101

  Fly   255 GATDIYVCGLAYDVCVGATAVDALSAGYRT-ILIDDCCRGTDVHDI------EHTKEKVNTSDGV 312
            ....:.:||:...||:..||:|.|..|.:. :.:|.|...::::.:      :|:...::||:.:
  Rat   102 QLKSVLLCGIETQVCILNTALDLLDRGLQVHVAVDACSSQSEMNRLVALARMQHSGVFLSTSEAL 166

  Fly   313 IVHTNQVKAMAEGRDRR-------PELG 333
            .:...:..|..:.::.:       ||:|
  Rat   167 TLQLIKDAAHPQFKEIQKILKEPVPEIG 194

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NaamNP_001262738.1 EFh 20..81 CDD:238008
EF-hand_7 21..82 CDD:290234
nicotinamidase 97..315 CDD:238493 28/132 (21%)
Isoc2bXP_006228336.1 YcaC_related 20..172 CDD:238494 28/135 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG1335
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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