Protein Alignment Nup58 and nup62l

DIOPT Version :9

• Sequence 1: NP_650821.2
• Gene: Nup58 / 42342
• FlyBaseID: FBgn0038722
• Length: 546
• Species: Drosophila melanogaster
• Sequence 2: NP_001107068.1
• Gene: nup62l / 563392
• ZFINID: ZDB-GENE-030131-8491
• Length: 507
• Species: Danio rerio
• Alignment Length: 574
• Identity: 143/574 - (24%)
• Similarity: 206/574 - (35%)
• Gaps: 172/574 - (29%)

  Fly     3 TPTTNNAI--------GGATAATGAFAFGA-RPATTT--APPPSFGAATSTPT-----------F 45
            ||.|..|.        |.:|.|.|.|:||| :|.|..  .||.......:.||           |
Zfish    17 TPKTTAAATTGFGVPQGSSTPAGGGFSFGANQPQTQNFGNPPSQIAGLLAQPTQNNGSTQGGFSF 81

  Fly    46 GAAPATTSL---FAAPAATPAFGAPA----ATPAFGAPASTPGFGATSTAAPAFGTAAATP---- 99
            ||...:|:.   |:...:.|....||    ||......|||.|.|.:........|||..|
Zfish    82 GAQTQSTTAGGGFSFGGSLPKLSTPAAPQPATTGVSLGASTTGTGFSLGGLTPQTTAAQQPMGGF 146

  Fly   100 AFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPAATSAFGAPAATTAFGAPASTQAS 164
            :||.|...:|..|||......:....|..|.....|...:.|:|:|......|:|..|||||..|
Zfish   147 SFGAPKVQAASVAPAQPTPVLSLGVQPTTGLSLGAPTAASIASTTAINFGIKTSATPAPASTALS 211

  Fly   165 AFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGTTATTAAAAM------PASLS-SGIGSFS 222
            :..:.||.      :..||.|..|.|.|   .|..|::..:.|..|      ||||| ..:|:.
Zfish   212 SQSSTAPV------SSLFANPIASTPVT---GFTLGSSTASVAPVMTSGSSAPASLSLKPLGAV- 266

  Fly   223 FPKPQATTAASLNFNTTTTTATAQPFNTGLKLGTTNATTTLGGGGIFSKPAGQAAAPAASTFVGL 287
               |..||||:   :|..||.    |:.|||   |.|:|.|            |:..|.||.|
Zfish   267 ---PAITTAAA---STGATTG----FSLGLK---TAASTAL------------ASTTATSTTV-- 304

  Fly   288 GGIDVTA-TQPKLGDNKQDGIKIKETQVPDEIIKTVDGLKAYIKQQKTISSDIGRTSTSKFTNVS 351
                ||| |.|                     :.:...|:|.|.:..:...|..|....:.|.|:
Zfish   305 ----VTASTAP---------------------VMSYAQLEALINKWSSELEDQERHFLQQATQVN 344

  Fly   352 HEITNLKWALQNMATLVEGSNQQIRLMRQETVKAIQSLEMAQRTQDTPAGLQFENNAPFQYFQCL 416
                    |...|  ||| :.::|..:.    |.::.:::.||..|
Zfish   345 --------AWDRM--LVE-NGEKITALH----KDMEKVKLDQRRLD------------------- 375

  Fly   417 VAKYEQDLIAFRQQIALTERHMHAISNPQSISPDDLKRGFRQLNESFISLAGRLHEVHQRVEEHK 481
               .|.|.|..:|      :.:..:.:|              |.||....:|.::  .|..:|.:
Zfish   376 ---QELDFILSQQ------KELEDLLSP--------------LEESVKEQSGTIY--MQNADEER 415

  Fly   482 EHYLNLRRYRLRDTTNV-FERIDNPPLPTVEPQRISSGPT----PFSNISALMN 530
            |     |.|:|.:..:. .:|:.......:|....||||.    |...|..::|
Zfish   416 E-----RTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTADPLQQICKILN 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nup58	NP_650821.2	PHA03247	<25..195	CDD:223021	54/193 (28%)
		Nucleoporin_FG2	136..>525	CDD:374260	94/401 (23%)
nup62l	NP_001107068.1	Nsp1_C	313..414	CDD:282867	27/159 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R852
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.940