DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nup58 and Nup58

DIOPT Version :10

Sequence 1:NP_650821.2 Gene:Nup58 / 42342 FlyBaseID:FBgn0038722 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_314898.5 Gene:Nup58 / 1275631 VectorBaseID:AGAMI1_012137 Length:515 Species:Anopheles gambiae


Alignment Length:496 Identity:216/496 - (43%)
Similarity:270/496 - (54%) Gaps:87/496 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPA----FGAPAATPAFGAPAA 142
            ||..:|:||||       :||.|||.:...|.||..|..||||.||    |||||......||.|
Mosquito     6 FGTPTTSAPAF-------SFGTPAAATTSIAAAAPLATAAAAAAPATGFSFGAPATATTTTAPTA 63

  Fly   143 TS-AFGAPAATTA-------FGAPA-STQASAFGAP-APAVGTVAPTFSFATPATSAPTTAPPAF 197
            |. :||.||||||       ||..| ||.|:.|||. :.:.||.|       .||:..|.|.|..
Mosquito    64 TGFSFGKPAATTATAAAPLSFGLGATSTAATPFGAGLSVSAGTTA-------TATTTSTFAVPTL 121

  Fly   198 GFGTTATTAAAAMPASL---SSGIGSFSFPKPQATTAASLNFNTTTTTATAQPFNTGLKLGTTNA 259
            .|||.||..|.....:|   ::|.|.|...|            .|||.||         |....|
Mosquito   122 NFGTAATATAGGATGTLGLGNAGGGLFGAAK------------ATTTVAT---------LAAAPA 165

  Fly   260 TTTLGGGGIFSKPAGQAAAPAASTFVGLGGIDVTATQPKLGDNKQDGIKIKETQVPDEIIKTVDG 324
            |||..           |||||.   :||||:|:.|.|||..:.|.|..|.||:|||.|||.||:.
Mosquito   166 TTTTA-----------AAAPAT---IGLGGVDINANQPKSVEGKSDNTKAKESQVPQEIISTVEH 216

  Fly   325 LKAYIKQQKTISSDIGRTSTSKFTNVSHEITNLKWALQNMATLVEGSNQQIRLMRQETVKAIQSL 389
            ||.|||:||||.|||.|:|..|.:|||.||.:|...|..::..|..:...|:::|.||....:..
Mosquito   217 LKEYIKKQKTIGSDIARSSARKMSNVSSEIKSLNSTLAELSNSVSNNQNAIKMLRHETSGITRQA 281

  Fly   390 EMAQRTQDTPAGLQFENNAPFQYFQCLVAKYEQDLIAFRQQIALTERHMHAISNPQSISPDDLKR 454
            :||||||:|||||||||..|.|||..|:.|||.|||..:||:.|||:||::::.||..:|.|||.
Mosquito   282 DMAQRTQETPAGLQFENTLPLQYFIELIQKYESDLINLKQQVELTEKHMNSLTTPQYFTPQDLKL 346

  Fly   455 GFRQLNESFISLAGRLHEVHQRVEEHKEHYLNLRRYRLRDTTNVFE----------RIDNPPLPT 509
            ..:|:.|||::|||||||:||:||..:|.|||||||.|||.|:|||          .:|...|  
Mosquito   347 CLQQIYESFVALAGRLHELHQKVETQREQYLNLRRYLLRDNTDVFEGGEGAKEGSSAVDKFAL-- 409

  Fly   510 VEPQRISSGPTPFS-----NISALMNKSYAAAASSASNATG 545
                .|||||||||     |:|..::.....|.:|..:..|
Mosquito   410 ----NISSGPTPFSTVMGGNVSFGVSLRQTGAGTSLWSGAG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nup58NP_650821.2 PHA03247 <25..195 CDD:223021 55/126 (44%)
Nucleoporin_FG2 136..>525 CDD:435043 184/416 (44%)
Nup58XP_314898.5 None

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