DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7342 and SPCC2H8.02

DIOPT Version :9

Sequence 1:NP_001247196.1 Gene:CG7342 / 42335 FlyBaseID:FBgn0038716 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_587972.1 Gene:SPCC2H8.02 / 2538980 PomBaseID:SPCC2H8.02 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:561 Identity:111/561 - (19%)
Similarity:194/561 - (34%) Gaps:169/561 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 NISTPNTCYSYNYELYMGYQSFPSEMDWVCADAWKLTLGQSMFFVGSVVGSMVLGYLADVVGR-- 134
            |:.:|...|.| :....|:|.:||.:..|...|..         :|:::|.::.|:|.|..||  
pombe    60 NLVSPILAYLY-WGGLTGHQDYPSGIRGVVNAATN---------IGNIMGQLLFGFLGDFFGRKF 114

  Fly   135 -----LPILIVAN--LIAMTGNLLTIWSTNVTLFCMFRMISGIATDSNFVMMYILVMEYMRPSVR 192
                 :.::|:|.  :|.:...:.|..:..:.||. ||::.||....::.|...:..|  :..:.
pombe   115 VYGKEMMVVIIATILIICLPDRIPTPTAKMMWLFA-FRVMLGIGIGGDYPMSASITSE--QSLIN 176

  Fly   193 TLG--------------LSICIGFFYCLGSMAAPW-----IAVLMRSWR---GFLLTTSLPLLVV 235
            ..|              |:.|:.....|.....|.     ...|...||   |..|   .|.::|
pombe   177 RRGALLAWIFSNQGWGTLAGCVATLIILACFEKPLNDRGEYTKLNGVWRIQFGIAL---FPAVIV 238

  Fly   236 PFFYLIVPESIQWLISKQ-------KYDSAVVCLKRVAKINGRHVEESAYAEFI----EECKCSQ 289
            ....|.:.||.|:..||.       ..|||     ...:::....:||..|||.    .....|.
pombe   239 LIPRLRMQESEQFKNSKNMKSPGEGDLDSA-----SQIELHDFKKKESLTAEFTTSSPSTASLSD 298

  Fly   290 QNQKASPHLLDLFQ------------TPRLRRHT------------LILFFKS------------ 318
            :....|.|:....:            |..:..:|            .:.:||.            
pombe   299 KKNPGSVHIRPNNEVAPSSAPSRAPSTTSVESNTEGKESDIQTGSSFVSYFKEWRHAKLLIGSAL 363

  Fly   319 --MVITLCYDAVSRN----VQGLGISPFV------------MFSLSATAILPACLLIIALQDRIG 365
              .::.:.:..::.|    :|.:|.:..|            ...::....:|...:.:.|.:.:|
pombe   364 SWFLLDIAFYGINLNQSVILQEMGFNKGVNEYHILQKNAIGNLIIAVAGYIPGYWVSVVLIEVMG 428

  Fly   366 RKAMASASLLLSGIFISVTGGIIFAASASDKTTTLLVSLSVVGRFG-VTVA---YNSGAQ----- 421
            ||.:.....|:..:...|..|             ...::|..|||. |.:|   :|.|..     
pombe   429 RKWIQIQGFLICCLLFGVLAG-------------TWETISTGGRFACVALAQFFFNFGPNTTCFV 480

  Fly   422 YATELIPTCVR--GQGVAAVHVAGYAFTFFSAYILFTRSVFSPLPEII---------LGVLSLLG 475
            ...|:.|:.||  ..|:.|  ..|.|....||.:      |:.|.|:|         .|.: :.|
pombe   481 IPAEVFPSRVRAFSHGICA--ACGKAGAILSALL------FNKLTEVIGFGNVLWIFFGCM-VAG 536

  Fly   476 ACLCLLLPETLHRTLPTSLEDGENFGKNDRWYTFSFLEGRT 516
            |.:.|:||||.:|       |.:..   ||....:..:|||
pombe   537 AVVTLILPETANR-------DADLI---DRLEIAAMQQGRT 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7342NP_001247196.1 2A0119 12..491 CDD:273328 105/534 (20%)
MFS 93..>243 CDD:119392 36/180 (20%)
SPCC2H8.02NP_587972.1 2A0109 38..557 CDD:129965 107/549 (19%)
MFS 42..544 CDD:119392 100/526 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
TreeFam 00.000 Not matched by this tool.
11.000

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