DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dys and M116.5

DIOPT Version :10

Sequence 1:NP_001036722.1 Gene:Dys / 42327 FlyBaseID:FBgn0260003 Length:3598 Species:Drosophila melanogaster
Sequence 2:NP_501432.4 Gene:M116.5 / 177642 WormBaseID:WBGene00019792 Length:1020 Species:Caenorhabditis elegans


Alignment Length:903 Identity:223/903 - (24%)
Similarity:365/903 - (40%) Gaps:251/903 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DERQHIQKKTFTKWINSHLIDTQCTPVKDLFLDLRDGHRLLALLSTLTQTNLKPEKGRMRVHHIN 72
            |.|..:||||||||:|.||..|..| :.|||:|||||..|:|||..||...::.|.|..|.|.|.
 Worm    35 DVRDTMQKKTFTKWVNKHLTKTDHT-IVDLFVDLRDGFALIALLEALTGERIQRENGYTRFHRIQ 98

  Fly    73 NLNKVITEIQQHGVKLVNISSDDIVGGNAKLTLGLIWLIALEF-------------------NGQ 118
            |:...:..::...:|||||..:|||.||.||||||||.|.|.|                   |.:
 Worm    99 NVQYCLDFLKMKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQVSVIRQRLLLESSQHEQTNEK 163

  Fly   119 HLVKSHSS------NGVEKSLLAWARQYTE--PHGLQLNDFSSSWSDGRAFLMILDAHVEELNLQ 175
            |...|..|      .....:||.||::.|.  |.|..:| ||:||.||.||..|:..:     ..
 Worm   164 HTTNSQDSIHRSETTSARDALLQWAKRTTAEYPRGNVIN-FSNSWRDGLAFNAIIHRY-----RS 222

  Fly   176 AALQQHAL--------KRLHLAFDLAHRHFKIEKLLDAEDVHTHKPDNKSIQMYVMCLYHAMESM 232
            :|:..:.:        :||::||..|.|.|.:|:|||||||.|:.||.|||..||..||:|:   
 Worm   223 SAIDWNKINSDSVSNTERLNIAFAAADREFGVERLLDAEDVDTNNPDEKSIITYVSSLYNAL--- 284

  Fly   233 RTRQQEQEQDE-----GQ--DQDPGRVPCTSITDLDEV-----PLDNDQT-----SLGLYTSDSA 280
               .||.|..:     |:  :::.|::.    .|.|.:     .:..|:.     ||.|.:...:
 Worm   285 ---PQEPEMSKFAASGGKRLEEEIGKLQ----ADADHIFEALAVISKDEALQESPSLLLVSKQVS 342

  Fly   281 GSMEQR---------------SSGELKTHSMRPLSTATNASVEISGYQSALEAVLTLLLEDEQLL 330
            ..:||.               |..:|...:..|.|.|......:...:.|...|..|:.:.|.|:
 Worm   343 KKIEQLKVLLKLVEEKKDTFISKCKLVMRTAGPESDAKELDSLMKHVEDAYSDVFELISDKEGLI 407

  Fly   331 ---------SQNLPDPQD----FQTAKLQFHENESFMLKLTEHQE--------------YVGEAL 368
                     |.::|:.:.    |..|..:|...     :|.:.::              ||    
 Worm   408 DRCNASNINSDSVPNTESLNLAFAAADPEFGAG-----RLLDAEDVDTNNNPDEKPVITYV---- 463

  Fly   369 EEGSNLINESQ---------KAGAGLSQE------DQNEVRQQMVLLNERWETLRLRALDVQAKI 418
               |:|.|..|         ..|.|..:|      |.:.:.:.:.::::.      .||.....:
 Worm   464 ---SSLKNAPQDPEMSRLAASGGKGFEEEIGKLQADADHIFEALAVMSKD------EALQESPSL 519

  Fly   419 LMRLAEFQKQKLEQLRQFLTSVEDR----ISH----MSDIGPTLEEAEKQLLEAQKLKADLSEQQ 475
            |:...:.:..|:::|::.|..||::    ||.    |...||   ||:.:.|::      |.:|.
 Worm   520 LLYSKQIRFNKIQKLKELLKPVEEKKDTFISECKLVMKTAGP---EADTKELDS------LLKQV 575

  Fly   476 ELVDSLSSMVVIVNDTSGNFNDLEDRLSALGERWSHVVKWSDLRKEKLQQYKCISRWLDAREQDL 540
            |  |:.|.:..:::|..|    |.||.:|           |::..:.:...:.::..|.|.:.:.
 Worm   576 E--DAYSDVFELISDKEG----LIDRCNA-----------SNINSDSVSNTERLNIALAAADAEF 623

  Fly   541 ---KLMESRDV-----TDVGGITQRINELNYCAKDLLELQRYLID----LRQMVAATLQDGD--- 590
               :|:::.||     .|...|...::.||.......|:.:|:..    |.:.:.....|.|   
 Worm   624 GAGRLLDAEDVDTNNNPDEKSIITYVSSLNNAFPLEPEMSKYVASGGKRLEEEIGKLQADADHIF 688

  Fly   591 ------DKGERVLIQLESYEDRLDALKQIVEVQTVRIETKGFNFGRDRASYDDSRVVRPEGWVDY 649
                  .|.|.:   .||....||:.:...:::.:::..|.....:|....:...|::..|    
 Worm   689 KALEEISKDEAL---QESPSLLLDSKQVSKKIEQLKVLLKPVEEKKDTFISESKLVMKTVG---- 746

  Fly   650 QMIIRFGEDDSQEDD-----------DEHDLASKKRKLRNADNFNALENHIMEHFGYVQEVEQKL 703
                  .|.|::|.|           |..:|.|.|..|  .|..|| .|.|..            
 Worm   747 ------PESDAKELDSLMKHVEDAYSDVVELISDKEGL--IDRCNA-SNRIAH------------ 790

  Fly   704 QQLQRQSLRQQCELLKELQAENSRRCGTLPELKKLYEVCELEDPSRNLLLEETHIKQL 761
            .|.:.:.:..:.|||||     :..|.|..:::|:.|        ......:||||::
 Worm   791 PQTETEKITNEIELLKE-----TCSCCTPYQIEKISE--------NYYRFGDTHIKRM 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DysNP_001036722.1 CH_DMD-like_rpt1 12..118 CDD:409035 55/124 (44%)
CH_SF 129..229 CDD:469584 43/109 (39%)
SPEC 312..525 CDD:238103 49/262 (19%)
PRK03918 <716..1238 CDD:235175 13/46 (28%)
SMC_prok_B <995..1279 CDD:274008
SPEC 1174..1365 CDD:238103
SPEC 1289..1485 CDD:413338
SPEC 2369..2576 CDD:238103
SPEC 2477..2714 CDD:238103
WW 2852..2882 CDD:238122
EFh_DMD_like 2919..3085 CDD:320000
EF-hand-like motif 2919..2958 CDD:320000
EF-hand-like motif 2961..2995 CDD:320000
EF-hand-like motif 3001..3037 CDD:320000
EF-hand-like motif 3050..3085 CDD:320000
ZZ_dystrophin 3110..3158 CDD:239074
M116.5NP_501432.4 CH_PLEC-like_rpt1 38..142 CDD:409037 53/104 (51%)
CH_SF 179..285 CDD:469584 44/117 (38%)
CH_SF <422..469 CDD:469584 8/58 (14%)
CH_SF <604..657 CDD:469584 9/52 (17%)
GAS2 796..868 CDD:128539 13/53 (25%)
Blue background indicates that the domain is not in the aligned region.

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