DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aptx and HNT3

DIOPT Version :10

Sequence 1:NP_650805.1 Gene:Aptx / 42322 FlyBaseID:FBgn0038704 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_014901.1 Gene:HNT3 / 854432 SGDID:S000005784 Length:217 Species:Saccharomyces cerevisiae


Alignment Length:229 Identity:65/229 - (28%)
Similarity:94/229 - (41%) Gaps:79/229 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSWSSALIKDISKPENL------IISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLS- 58
            |||..||...::.||.:      ....::: :|.|.|||::.|.|:|     |....|:|||.: 
Yeast     1 MSWRYALKNYVTSPETVNDDTVTYFDDKVS-IIRDSFPKSECHLLIL-----PRTMQLSRSHPTK 59

  Fly    59 --------------------------------------------LLEELHLLARNVVEVKGVRWQ 79
                                                        :|::.:...||.|:       
Yeast    60 VIDAKFKNEFESYVNSAIDHIFRHFQEKFRIKKSDDDKDPCWDDILKDKNKFVRNFVQ------- 117

  Fly    80 DFNVGFHAEPSMQRLHLHVISKDFVSTSLKTKKHWNSFNTELFVPYTKLYAQLEKENSISRLPKS 144
               ||.|:.|||..||:|||||||.|..||.|||:|||||..|:.:..|  .|..:|  ....|.
Yeast   118 ---VGIHSVPSMANLHIHVISKDFHSVRLKNKKHYNSFNTGFFISWDDL--PLNGKN--LGTDKE 175

  Fly   145 LKDELLAK-PLICNQCEFVARNLPS----LKGHL 173
            ::...|.: .|:|..|:   ||..:    ||.||
Yeast   176 IETTYLKEHDLLCCYCQ---RNFSNKFSLLKKHL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AptxNP_650805.1 DcpS_C 8..113 CDD:463415 38/155 (25%)
zf-C2HE 118..179 CDD:465082 17/61 (28%)
DcpS_C 235..339 CDD:463415
zf-C2HE 344..406 CDD:465082
KLF1_2_4_N <511..585 CDD:425360
HNT3NP_014901.1 HIT 15..139 CDD:395984 32/139 (23%)
zf-C2HE 153..212 CDD:465082 17/61 (28%)
Blue background indicates that the domain is not in the aligned region.

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