DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aptx and APTX

DIOPT Version :10

Sequence 1:NP_650805.1 Gene:Aptx / 42322 FlyBaseID:FBgn0038704 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_778243.1 Gene:APTX / 54840 HGNCID:15984 Length:342 Species:Homo sapiens


Alignment Length:178 Identity:75/178 - (42%)
Similarity:105/178 - (58%) Gaps:9/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIFHLNRSHLSLLEELHLLA 67
            ||..|...:..|:..:...|..|||.||:|||::|:||||...|.|:..:.|.||.||:.:|.:.
Human   167 WSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVG 231

  Fly    68 RNV-VEVKGVRWQDFNVGFHAEPSMQRLHLHVISKDFVSTSLKTKKHWNSFNTELFVPYTKLYAQ 131
            ..| |:..|.....|.:|:||.|||..:||||||:||.|..||.||||||||||.|:   :..|.
Human   232 EKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFL---ESQAV 293

  Fly   132 LEKENSISRLPKSLKD---ELLAKPLICNQCEFVARNLPSLKGHLVGH 176
            :|......|:  :::|   |||..||.|::|:.:..::|.||.||..|
Human   294 IEMVQEAGRV--TVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKH 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AptxNP_650805.1 DcpS_C 8..113 CDD:463415 45/105 (43%)
zf-C2HE 118..179 CDD:465082 21/62 (34%)
DcpS_C 235..339 CDD:463415
zf-C2HE 344..406 CDD:465082
KLF1_2_4_N <511..585 CDD:425360
APTXNP_778243.1 FHA_APTX 3..102 CDD:438787
aprataxin_related 164..265 CDD:238609 40/97 (41%)
zf-C2HE 283..342 CDD:465082 21/62 (34%)
Blue background indicates that the domain is not in the aligned region.

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