DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18493 and pcp-3

DIOPT Version :10

Sequence 1:NP_650803.1 Gene:CG18493 / 42319 FlyBaseID:FBgn0038701 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001366906.1 Gene:pcp-3 / 177740 WormBaseID:WBGene00003958 Length:1080 Species:Caenorhabditis elegans


Alignment Length:507 Identity:141/507 - (27%)
Similarity:237/507 - (46%) Gaps:69/507 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DIPKIKDVPLLVKTLKNLNRG-PPHQVVTK----------RANVQEKWITQKLDNFNASNTQTYQ 75
            |:|..|..|  ....|.:..| |||..:.:          ....::....|:.|:|:..|...:|
 Worm   535 DVPSKKTFP--EPKFKKVFLGRPPHGFLPEPDYELKEDAYPPGFEQGTFRQRQDHFDNQNADFFQ 597

  Fly    76 MRYLLNDEFQTEGSPIFIYLGGE------WEIEESMVSAGHWYDMAQEHNGVLVYTEHRYYGQSI 134
            .::..|.::..:|.|.|:.:|||      |.:.|::.    :...|:::...:...|||:||.|:
 Worm   598 QKFFKNAQWAKQGGPNFLMIGGEGPESARWVLNENIT----YLTWAKKYGATVYLLEHRFYGDSV 658

  Fly   135 PTSTMSTEDLKYLDVKQALADVAVFIETFKAENPQLANSKV-ILAGGSYSATMVVWFKRLYPDLI 198
               .....:.|.|:..|.|.|:|.||   ||.|.:...|.. |..|||||..|..|.:.::|||:
 Worm   659 ---VGDNTNFKLLNSLQMLYDLAEFI---KAVNIRTGTSNPWITFGGSYSGAMSAWMREVFPDLV 717

  Fly   199 VGGWASSAPILAKVDFTEYKEVVGQAFLQLGGQKCYDRIENGIAELESMFANKRGAE-ARAMLRL 262
            ||..|||.|:.||.||.||..||..: ::....||.|.|::|...:.::|..|.|.: ..::.:|
 Worm   718 VGAVASSGPVYAKTDFYEYLMVVENS-VRRYNSKCADNIQSGFDAIRTLFLTKEGRQNLSSIFQL 781

  Fly   263 CNSFDDQ-NDLDLWTLFSSISNIFAGVAQYQGTGDIEYYCDY-------LLSFNDDATAIANFV- 318
            ...|.|. .|.|....||::...|.|..||.|.....|...|       ::| ||..|.:.|.| 
 Worm   782 QPPFSDSVTDTDQHYFFSNVYGNFQGAVQYSGDNTGPYANGYGIPDMCKIMS-NDSNTPLNNIVA 845

  Fly   319 -------YWAWGMGNCIDARYEGSVEYYLWGVDHFD----ASRPWYYQTCNEYGWYQSSGSRNQP 372
                   ::..|....:|..|:..:. ||....|:.    |...|.:|||:|:|::||:.|.|..
 Worm   846 FNQFMIIFYNGGQYTGMDNNYQNMIT-YLKTAQHYGPDSAAGLLWTWQTCSEFGYFQSADSGNGI 909

  Fly   373 FGTKFPATLYINLCGDVFSSQYGNEQINNNAASTNEYFG------GMEPGVDNIYMTHGELDPWN 431
            ||:..|..:|:.:|.|||::||....|:.:.|:||..:|      |     .|:.:.:|.:|||:
 Worm   910 FGSPTPVNMYVQMCMDVFNNQYQRTSIDYSIANTNYKYGERFHYRG-----TNVVLPNGNVDPWH 969

  Fly   432 PMGHGVEQGATVIA----NASHCSDFGSIKSTDSDEMRASKEKLAELVRQWL 479
            .:|......::|::    ..:||:|....:..|...::..::.:.:.:.:||
 Worm   970 ALGLYYPTDSSVVSYLIDGTAHCADMYPARDADVPGLKVVRDLVDQNIAKWL 1021

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18493NP_650803.1 alpha/beta hydrolases 61..471 CDD:473884 130/447 (29%)
pcp-3NP_001366906.1 alpha/beta hydrolases 50..478 CDD:473884
Peptidase_S28 583..1013 CDD:310284 130/447 (29%)
Blue background indicates that the domain is not in the aligned region.

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