DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG5555 and AT1G72220

DIOPT Version :9

Sequence 1:	NP_001262724.1	Gene:	CG5555 / 42302	FlyBaseID:	FBgn0038686	Length:	558	Species:	Drosophila melanogaster
Sequence 2:	NP_177367.1	Gene:	AT1G72220 / 843554	AraportID:	AT1G72220	Length:	413	Species:	Arabidopsis thaliana

Alignment Length:	354	Identity:	74/354 - (20%)
Similarity:	123/354 - (34%)	Gaps:	116/354 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly   192 FMVLLEFRSNESALEFYKSYNGSTYNSLEPDS-------------LCHAVW-------------- 229
            |.::.:|.|:.     ....|..||.|...|:             :.|.:|
plant   100 FFLVAKFFSDS-----VNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINS 159

  Fly   230 --VSEVERSEHGAPPMGHTELPTCPVCLERMDESVDGVLTIL--CNHAFHASCLMKW--GDSTCP 288
              :...:|.:      |..|...|||||...:|  |..|.:|  ||||||.||:..|  ..:.||
plant   160 ITICNYKRGD------GLIERTDCPVCLNEFEE--DESLRLLPKCNHAFHISCIDTWLSSHTNCP 216

  Fly   289 VCR------HVQTP---GLVE-----DSVCMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRAT 339
            :||      .|.||   |.||     ....:|.:|.|                :..|.....|
plant   217 LCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVD----------------EEDHGEIENR-- 263

  Fly   340 NHTFAMQLGTSSVWDYAGDNFVH-RLFQNKSDGKLVASQTEKDER------------EEKIDSMQ 391
                     ..|.:..:.|:.:. .:::..|||.  .|:||..||            .:.::|:.
plant   264 ---------VDSDFKESDDSDIRIEIYRFDSDGD--GSETETKERVRVLKECMDPNGGDSVNSLS 317

  Fly   392 MEFTYLLTSQLDTQRKYYEERMERLEQEWQNHKATANDAKTEVSELQQLQQNMQKEKVNLERKLA 456
            ...|::  ..:|...|..|.:.|...:  .|.:..|:.::.......||:::....::|     .
plant   318 HTKTHV--ESVDFPGKSCENQSEEFTR--HNGEDEASCSEENGGGSNQLRRSCDSGELN-----G 373

  Fly   457 QHTAKLKDVQKQLNEERELSKALQSNQSS 485
            :.|......|..::     |..|::|.||
plant   374 ETTGDEGKSQSDIS-----SSTLKTNGSS 397

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5555	NP_001262724.1	RRM_BRAP2	150..234	CDD:241162	10/70 (14%)
		zf-RING_2	249..291	CDD:290367	20/45 (44%)
		zf-UBP	304..363	CDD:280334	7/59 (12%)
		CENP-F_leu_zip	366..517	CDD:287450	26/132 (20%)
		DUF4200	396..517	CDD:290574	16/90 (18%)
AT1G72220	NP_177367.1	zf-rbx1	<172..219	CDD:289448	21/48 (44%)
AT1G72220	NP_177367.1	zf-RING_2	176..219	CDD:290367	20/44 (45%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000