DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG5555 and AT3G14320

Sequence 1:NP_001262724.1 Gene:CG5555 FlyBaseID:FBgn0038686 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_188049.1 Gene:AT3G14320 AraportID:AT3G14320 Length:204 Species:Arabidopsis thaliana

Alignment Length:110 Identity:27/111 (24%)
Similarity:37/111 (33%) Gaps:42/111 (38%)


  Fly   251 CPVCLERMDESVDGVLTILCNHAFHASCLMKW--GDSTCPVCR---------------------- 291
            |.|||..:.:.....:...|:|.||..|:..|  .:||||:||                      
plant    88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRPELGGRDKSFN 152

  Fly   292 --HVQT---------------PGLVEDSVCMEC-EGTDSLWICLI 318
              |.||               ..::||..|.|. ||...|...:|
plant   153 QNHDQTSEHHEFSTDPPTNTDTAIIEDGGCGEANEGQPELTAVVI 197

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG5555NP_001262724.1 RRM_BRAP2 150..234 CDD:241162
zf-RING_2 249..291 CDD:290367 15/42 (36%)
zf-UBP 304..363 CDD:280334 6/17 (35%)
CENP-F_leu_zip 366..517 CDD:287450
DUF4200 396..517 CDD:290574
AT3G14320NP_188049.1 zf-RING_2 87..130 CDD:290367 15/42 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.750 Consistency score
10.910

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