DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42359 and vma21

DIOPT Version :9

Sequence 1:NP_732404.2 Gene:CG42359 / 42299 FlyBaseID:FBgn0259705 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001037928.1 Gene:vma21 / 733545 XenbaseID:XB-GENE-5730849 Length:104 Species:Xenopus tropicalis


Alignment Length:90 Identity:25/90 - (27%)
Similarity:43/90 - (47%) Gaps:22/90 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PVEHHTQQEDTSAEVFLWLLAYSVLMFTLP-----------FLGFYGVRSWLQESFPHLDLFTVN 81
            |:...:|.|.:.......||.::|||..||           |.|.||:.:  ::|:         
 Frog    15 PLPEFSQNEGSLVATLKTLLFFTVLMIMLPIGLYFSSKVYVFEGTYGMSN--RDSY--------- 68

  Fly    82 CWSVLTAVVVVNLVVAMYVLKAFRE 106
            .::.:.|||.|::|:||:|..|:.|
 Frog    69 FYAAIVAVVAVHVVLAMFVYVAWNE 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42359NP_732404.2 VMA21 41..>84 CDD:286525 12/53 (23%)
vma21NP_001037928.1 VMA21 29..91 CDD:370497 20/72 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31792
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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