DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nanos and nanos1

DIOPT Version :10

Sequence 1:NP_476658.1 Gene:nanos / 42297 FlyBaseID:FBgn0002962 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_988857.1 Gene:nanos1 / 394451 XenbaseID:XB-GENE-868377 Length:128 Species:Xenopus tropicalis


Alignment Length:64 Identity:34/64 - (53%)
Similarity:44/64 - (68%) Gaps:2/64 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 SKAKEISRH--CVFCENNNEPEAVINSHSVRDNFNRVLCPKLRTYVCPICGASGDSAHTIKYCP 371
            |||.|...|  |.||.:|.|.:::.:||.:|....|||||.||.|.||:|||:||.|||::|||
 Frog    50 SKAAEAHGHKGCGFCRSNREAQSLYSSHRLRAPDGRVLCPVLRGYTCPLCGANGDWAHTMRYCP 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nanosNP_476658.1 NBR_nanos 135..182 CDD:467849
zf-nanos 319..372 CDD:461728 29/53 (55%)
nanos1NP_988857.1 Essential for its translational repressor activity. /evidence=ECO:0000250 7..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..58 4/7 (57%)
zf-nanos 61..114 CDD:461728 29/53 (55%)
C2HC 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00855 61..88 10/26 (38%)
C2HC 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00855 96..112 10/15 (67%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.