Protein Alignment snRNP-U1-C and AT4G03120

DIOPT Version :10

• Sequence 1: NP_650767.1
• Gene: snRNP-U1-C / 42274
• FlyBaseID: FBgn0261792
• Length: 145
• Species: Drosophila melanogaster
• Sequence 2: NP_567250.1
• Gene: AT4G03120 / 828071
• AraportID: AT4G03120
• Length: 207
• Species: Arabidopsis thaliana
• Alignment Length: 194
• Identity: 74/194 - (38%)
• Similarity: 88/194 - (45%)
• Gaps: 53/194 - (27%)

  Fly     1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------ATTAAF- 57
            ||:|||||||||||||||||||.|..|.||:.||:.|||::.|:|.|.|||       ..|..:
plant     1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQTGGYQ 65

  Fly    58 KAGKITNN--------PFAGGPGGAP--------PKPAGVSIPP----PNMGAPPRPGMPGMPYM 102
            :.|.:.|.        |....||..|        |:|   .:||    |..|.|.....||.|..
plant    66 QVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRP---MMPPQGYMPPPGVPQMMAPPGAPLP 127

  Fly   103 PPLMNPMM---GMRP-------PPIMNPMAMMG-----------PPPPLGTIPGVRP-GIMNGP 144
            ||..|.::   ||.|       ||.|.|:...|           ||||..|.|...| |..|.|
plant   128 PPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNGLPPPPPYHTNPAAPPSGNFNNP 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-C	NP_650767.1	zf-U1	1..38	CDD:368798	27/36 (75%)
AT4G03120	NP_567250.1	zf-U1	1..38	CDD:368798	27/36 (75%)