DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a4a

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_573447.2 Gene:Slc5a4a / 64452 MGIID:1927848 Length:656 Species:Mus musculus


Alignment Length:575 Identity:147/575 - (25%)
Similarity:239/575 - (41%) Gaps:142/575 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGT 67
            |.|.:..||:::::::.||:||..|  :...:.....|||||:..:....::.|:.:|.|:..|.
Mouse    25 NAADISVIVIYFVVVMAVGVWAMLK--TNRSTVGGFFLAGRSMTWWPMGASLFASNIGSGHFVGL 87

  Fly    68 AEAIYTSGL-VWCQAPFGYALSLVFGGIFFANPMR-KQGYITMLDPLQDSF-GERMG---GLLFL 126
            |.....||: |.......:||.||.|.||.  |:. |.|.:||.:.|:..| |:|:.   .:|||
Mouse    88 AGTGAASGIAVTAFESHSFALLLVLGWIFV--PIYIKAGVMTMPEYLKKRFGGKRLQIYLSILFL 150

  Fly   127 PALC-----------GEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAY 180
             .:|           |.:|    |..|||..|.:.|       :||.:..||| |:.|||.||.|
Mouse   151 -FICVILTISADIFSGAIF----IKLALGLNLYLAI-------LILLAITAIF-TITGGLASVIY 202

  Fly   181 TDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHV------------------EPKKHWL 227
            ||.:|...:.:|.::.:.||:  ..||........::..:                  :|....:
Mouse   203 TDTVQAVIMLVGSFILMVFAF--VEVGGYESFTEKFMNAIPSVVEGDNLTINSRCYTPQPDSFHI 265

  Fly   228 YIDYGLLLVFGGIPW------------------QVYFQRVLSSKTAGRAQLLSYVAAAGCIL--- 271
            :.|    .|.|.|||                  ||..||.|..|.      ||:|.|| |||   
Mouse   266 FRD----PVTGDIPWPGTAFGMPITALWYWCINQVIVQRCLCGKN------LSHVKAA-CILCGY 319

  Fly   272 --------MAIPPVL-----IGAIAKATPWNETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFF 323
                    |.:|.::     ...:|...|.....:.|   :.|..|:...||::..|.|..:...
Mouse   320 LKLLPLFFMVMPGMISRILYTDMVACVVPSECVKHCG---VDVGCTNYAYPMLVLKLMPMGLRGL 381

  Fly   324 GLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIP 388
            .|..:.|::|||..|...||:::|..::|..| |:||||.|::...|:.:.|: |:.:|:.:.|.
Mouse   382 MLSVMLASLMSSLTSVFNSASTLFTIDLYTKI-RKKASERELLIAGRLFVSVL-IVTSILWVPIV 444

  Fly   389 SIYGLWSMCSDLVYV------ILFPQL---LMVVHFKKHCNTYGSLSAYIVALAIRLSGGEAILG 444
            .:    |....||:.      .|.|.:   .:|..|.|..|..|:....:|.|         ::|
Mouse   445 EV----SQGGQLVHYTEAISSYLGPPIAAVFLVAVFCKRANEQGAFWGLMVGL---------VMG 496

  Fly   445 LAPLIKYPGYDEETKEQMFP--------------FRTMAMLLSLVTLISVSWWTK 485
            |..:|....|.  |...:.|              |..:...:.::.::.||:.||
Mouse   497 LIRMIAEFSYG--TGSCLAPSSCPKIICGVHYLYFAIILFFVCILVILGVSYLTK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 141/565 (25%)
Slc5a4aNP_573447.2 SLC5-6-like_sbd 27..656 CDD:444915 146/573 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..593
Blue background indicates that the domain is not in the aligned region.

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