DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and kumpel

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_651446.2 Gene:kumpel / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster


Alignment Length:511 Identity:117/511 - (22%)
Similarity:198/511 - (38%) Gaps:122/511 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GVVSIVLFYLLI---LVVGIWAG-----RKKQ--SGNDS------EE-------EVMLAGRSIGL 47
            |:|..::|..::   .|:|.:.|     :|||  :|.|.      ||       :.::.||.:.:
  Fly   103 GIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQKLAGKDGGGAAGVEERRGSEALDYLVGGRQMKV 167

  Fly    48 FVGIFTMTATWVGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGI-------FFANPMRKQGY 105
            |....::.|::|.|..:.||:..||..|   .|..|......:.|.|       .|.|......|
  Fly   168 FPVALSLVASFVSGISLLGTSTEIYVYG---TQYAFILVTLAISGAISWYIFLPVFCNLQLTSTY 229

  Fly   106 ITMLDPLQDSFGERM---GGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAI 167
                :..:..|..|:   |..||:..   .:.|....:.....||:.:..:.....|.::|.|.|
  Fly   230 ----EYFERRFDRRVRIFGSCLFVVM---NILWQPICIYVPALTLNQVSGISVSKIVPVTSFICI 287

  Fly   168 FYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLS---------------DLEVDWI 217
            .||..||:..|.:||||| ..:.||. |.|........:|.||               |:..|..
  Fly   288 LYTSVGGIKGVVWTDVIQ-GTVMIGS-MLIVIIKGTLDLGGLSVVLDHNRQYDRLVGPDMTFDPT 350

  Fly   218 GHVEPKKHWLYIDYGLLLVF-GGIPW--------QVYFQRVL---SSKTAGRAQLLSYVAAAGCI 270
            ..:           |:..:| ||..:        |...||.|   ::|...:|.:||.:.....:
  Fly   351 ARM-----------GVFALFVGGALFKLQANGINQAIVQRYLTLPNNKDVKKALVLSLIGFMFVM 404

  Fly   271 LMAIPPVLIGAIAKATPWNETDYKGPYPLTVD---ETSMILPMVLQYLT------PDFVSFFGLG 326
            ||.   |.||.:|.|      ::....|:|..   ....::|:   |:.      |..|..|..|
  Fly   405 LMC---VYIGLLAFA------EFYHCDPITTGLARAKDQVIPL---YVVKNVGHIPGLVGLFVAG 457

  Fly   327 AVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIY 391
            ..||| :||..:::.|.:.:...:..:...::..:|.:..:::|..:|..|:: ::.::.|....
  Fly   458 VFSAA-LSSLSTALNSLSGVILTDFVEPFRKKPLTERQTAYLLRGVVISFGLI-SMASVPIVQRL 520

  Fly   392 GLWSMCSDLVYVILFPQLL------MVVHFKK--------HCNTYGSLSAYIVALA 433
            ||....|..|..|....||      |::.|.|        .|.:  |.:||||..|
  Fly   521 GLVMQLSSTVAAITCGPLLGAFSVGMLLPFVKTESLLTGISCAS--SFTAYIVVRA 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 116/510 (23%)
kumpelNP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 116/509 (23%)

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