DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a1

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_956975.1 Gene:slc5a1 / 393654 ZFINID:ZDB-GENE-040426-1524 Length:658 Species:Danio rerio


Alignment Length:699 Identity:161/699 - (23%)
Similarity:267/699 - (38%) Gaps:194/699 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWA----GRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGY 63
            |.|.:..||:::|::|.||:||    .|....|      ..|||||:..:....::.|:.:|.|:
Zfish    25 NPADISVIVIYFLVVLAVGVWAMVRTNRATVGG------FFLAGRSMVWWPIGASLFASNIGSGH 83

  Fly    64 I-----NGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSF-GERMGG 122
            .     .|.|..|...|..|........|..:|..|:.     |.|.:||.:.|:..| |:|:..
Zfish    84 FVGIAGTGAAAGIAIGGFEWNALVVVIILGWLFVPIYI-----KAGVVTMPEYLKKRFGGQRIRI 143

  Fly   123 LLFLPALCGEVF-------WAAGIL--AALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSV 178
            .|.:.:||..||       :|..|.  .|||..:.:        :|::...|...||:.|||.:|
Zfish   144 YLSVLSLCLYVFTKISADMFAGAIFINQALGLNIYL--------AVVILLLITALYTVTGGLAAV 200

  Fly   179 AYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDW-------IG---------------HV- 220
            .|||.:|...:.:|.::.:.||::.  ||...:....:       ||               |: 
Zfish   201 IYTDTLQTIIMVVGSFILMGFAFNK--VGGYENFRDSYMTAIPSVIGTNISESCYTPRADSFHIF 263

  Fly   221 -EP---KKHWLYIDYGLLLVFGGIPW-----QVYFQRVLSSKTAGRAQLLSYVAAAGCILMA--- 273
             :|   ...|..:.:||.:..|   |     ||..||.||:|.      ||:| .|||||..   
Zfish   264 RDPINGDLPWPGLLFGLTIQAG---WYWCTDQVIVQRCLSAKN------LSHV-KAGCILCGYLK 318

  Fly   274 -IPPVLI---GAIAKATPWNETDYKGPYPLTVDE-----------TSMILPMVLQYLTPDFVSFF 323
             :|..|:   |.|::....:|.....|     ||           |::..|.::..|.|:.:...
Zfish   319 LLPMFLMVFPGMISRVLYPDEIACVDP-----DECKAVCGAEVGCTNIAYPKLVVDLMPNGLRGL 378

  Fly   324 GLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRV-AIIVVGI--------- 378
            .|..:.|::|||..|...||:::|..::|..| |.||.|.|::...|: .::::||         
Zfish   379 MLSVMLASLMSSLTSIFNSASTLFTMDIYTKI-RPKAKEKELMIAGRLFMLLLIGISIAWIPIVQ 442

  Fly   379 -------------LATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIV 430
                         :.:.:|..|.:::.|...|                   |..|..|:.....|
Zfish   443 TAQSGQLFDYIQSITSYLAPPIAAVFALAIFC-------------------KRVNEPGAFYGLCV 488

  Fly   431 ALAIRLSGGEAILGLAPLIKYPGYDEETKEQMFP--------------FRTMAMLLSLVTLISVS 481
            .|         ::|||.:|....|.  |...:.|              |..:...||.:.::|:|
Zfish   489 GL---------LVGLARMITEFAYG--TGSCVNPSNCPTIICGVHYLYFALILFGLSCILILSIS 542

  Fly   482 WWTKMMFESGKLPPSYDYFRCVV---NIPEDVQ-RVGDPSESGEQLSVMAGPLARSYGAATMA-- 540
            ..||      .:...:.|..|..   |..|.:. ...|.:|..:..|:....:....|....|  
Zfish   543 LMTK------PIEDKHLYRLCWSLRNNTEERIDLEADDWTEDQDSNSMETDEMREEPGCCKKAYN 601

  Fly   541 ---GKDERNGRINPALESDDDLPVAEARRINQETAQAQVKKMLDNATGV 586
               |.|:.|.   |.|..:.:   ||.:....:|.:..:.:.:.||..|
Zfish   602 WFCGFDQGNA---PKLTKEQE---AELKMKLTDTTEKPLWRNVVNANAV 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 136/579 (23%)
slc5a1NP_956975.1 SLC5sbd_SGLT1 27..658 CDD:271379 160/697 (23%)

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