DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a12

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_956662.1 Gene:slc5a12 / 393339 ZFINID:ZDB-GENE-040426-1343 Length:623 Species:Danio rerio


Alignment Length:546 Identity:116/546 - (21%)
Similarity:183/546 - (33%) Gaps:179/546 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLILV---VGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEAIY 72
            |:|..|.:|   :|::...|:::...| :|.::.||.:.......::||:::....:.|....:|
Zfish    13 VVFACLFVVSSGIGVFFAIKERNKAPS-KEFLVGGRQMSCGPVALSLTASFMSAVTVIGAPADVY 76

  Fly    73 TSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPALCGEVFWAA 137
            ..|..:  ..||.|.:.|   :||.                        ..||||     ||:.:
Zfish    77 RFGASY--VIFGVAYTFV---VFFT------------------------AELFLP-----VFYRS 107

  Fly   138 GI-------------LAALGATLSVIID---------------------MDHRTSVILSSCIAIF 168
            ||             |..:.|||..||.                     .|...|:..:..:..|
Zfish   108 GITSTYEYLELRFCKLVRVAATLIYIIQTILYTGVVVYAPALALNQVTGFDLWGSIFATGIVCTF 172

  Fly   169 YTLFGGLYSVAYTDVIQLFCIFIGLWMC----------IPFAWSNEHVGS-LSDLEVDWIGHVEP 222
            |...|||.:|.:||..|:..:.:|....          |...||....|. |...:.|    |.|
Zfish   173 YCTLGGLKAVVWTDAFQMVVMVVGFLTVLIQGSSRAGGIENVWSTSRTGGRLQVFDFD----VSP 233

  Fly   223 -KKHWLYIDYGLLLVFGGIPW-------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLI 279
             ::|    .:..|.|.|...|       |...||.:|.||.|.|:...|:...|..::....|:.
Zfish   234 LRRH----TFWTLSVGGTFTWLGIYGVNQSTIQRCISCKTEGHARWALYLNLLGLWIILFCAVVS 294

  Fly   280 GAI-----AKATPWNETDYKGPYPLTVDETSMILPMVLQYLTPDFV-----SFFGL-GAVSAAVM 333
            |.|     :...||:......|                ..|.|.||     :|.|| |...|...
Zfish   295 GLIMYSYYSHCDPWSSGLISAP----------------DQLMPYFVMEILGAFPGLPGLFVACAF 343

  Fly   334 SSADSSVLSAASMFARNVYKLIFRQ---KASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWS 395
            |...|:|.::.:..|..:|:....|   ..|.....|:.:...:..|:..|.||:....:.|   
Zfish   344 SGTLSTVAASINALATVMYEDFVSQCFPDLSNRAASWISKALCVAFGVACTTMAVAASYMGG--- 405

  Fly   396 MCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIVALAIRLSG--GEAILGLAPLIKYPGYDEET 458
                                             ||..|:.:.|  |..:|||..|    |.    
Zfish   406 ---------------------------------IVQAALSIHGMCGGPVLGLFSL----GI---- 429

  Fly   459 KEQMFPFRTM-AMLLSLVTLISVSWW 483
               :|||..: ..:..|:..||:|:|
Zfish   430 ---LFPFTNLKGAVGGLIVGISLSFW 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 114/542 (21%)
slc5a12NP_956662.1 SLC5sbd_SMCT2 4..533 CDD:212089 116/546 (21%)

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