DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and CG5687

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_647678.3 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster


Alignment Length:585 Identity:123/585 - (21%)
Similarity:222/585 - (37%) Gaps:123/585 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AGVVSIVLFYLLI--LVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGT 67
            :|...::|..:|:  |.:||:.|..::.|:.|.|  .|.|..:.:|....::|.:::....:.|.
  Fly    97 SGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNE--FLLGSEMSIFPVTLSLTTSFITAIELLGN 159

  Fly    68 AEAIYTSG--LVWCQAPFGYALSL---VFGGIFFANPMRKQGYITMLDPLQDSFGER---MGGLL 124
            ...:|..|  .|....|....:.:   :|..|:|     |....:..:.|...||:.   :|.:|
  Fly   160 PSEMYFQGTQFVLIVIPMVIVIPVAVKIFYPIYF-----KMELTSCYEYLGIRFGKEIRILGAVL 219

  Fly   125 FLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCI 189
            ::..:|   |:.|..:.|....||....:|.:.:|:|...:.:||:..||:.:|...|..|...:
  Fly   220 YVIQMC---FYTAVAVLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQAAVL 281

  Fly   190 FIGLWMCI------------PFAWSNEHVGSLSDLEVDWIGHVEP-KKHWLYIDYGLLLVFGG-I 240
            .:.|.:.:            .|..:::| ..|....:|    .:| .:|.::     .:|.|| .
  Fly   282 AVSLVLIVGLGCFYSGNPIQVFQTASDH-NRLEFFNMD----PDPTTRHTVW-----SVVIGGFF 336

  Fly   241 PW-------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYP 298
            .|       |...|:.:|.|:...|::....|..|.|::.:.....|.:.      .|.|....|
  Fly   337 YWTSLFCTNQASVQKCMSLKSLRLAKIALGFAIIGLIVVFLLNFYTGLMV------FTHYADCDP 395

  Fly   299 LT---VDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKA 360
            ||   :..|..:||   .|:...:                  ..:.|.|.:|...::.......|
  Fly   396 LTAGRISATDQLLP---YYVINTY------------------EHISSVAGIFVAGIFAASLGTVA 439

  Fly   361 SEMEIIWVMRVAIIVVGILATIMALTIP----SIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNT 421
            |.:..:    .|:....:|...|.:.|.    :.|..|   ..|.:.|....|:.:|   :|.. 
  Fly   440 SALNSL----SAVTCEDLLVNGMNIKISPEKGATYAKW---MSLGFGIASFGLVFIV---EHLG- 493

  Fly   422 YGSLSAYIVALAIRLSG-------GEAILGLAPLIKYPGYDEETKEQMFPFRTMAMLLSLVTLIS 479
             |.|.|     .:.|:|       |..:||:|      .....||...:     ..||||..:|.
  Fly   494 -GVLQA-----TLTLNGLIGGVTLGLFVLGIA------CKQANTKGAFY-----GGLLSLALVIF 541

  Fly   480 VSWWTKMM-FESGKLPPSYDYFRCVVNIPEDV-QRVGDPSESGEQLSVMAGPLAR-SYGAATMAG 541
            |....::: .|...||.|.|...|.||:...: ..:.:|.|..|:....:.|:.| ||...:|.|
  Fly   542 VGVVAQIVSVEQPALPTSIDKCDCHVNMTNIIGSLLTEPLEVIEEGGFTSWPIFRLSYMWYSMIG 606

  Fly   542  541
              Fly   607  606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 104/518 (20%)
CG5687NP_647678.3 SLC5sbd_NIS-SMVT 99..620 CDD:271383 122/583 (21%)

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