DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a9

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001382057.1 Gene:Slc5a9 / 366441 RGDID:1311383 Length:688 Species:Rattus norvegicus


Alignment Length:601 Identity:139/601 - (23%)
Similarity:225/601 - (37%) Gaps:192/601 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSI----------------GLFVGIFTMT 55
            :|.:|::::.:|.||||:..:...|...  ...|||||:                |||:|:    
  Rat    37 IVVVVIYFVFVLAVGIWSSIRASRGTIG--GYFLAGRSMTWWPIGASLMSSNVGSGLFIGL---- 95

  Fly    56 ATWVGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSF-GER 119
               .|.|...|.|    ..|..|.......||..:|..::.|     .|.:||...|:..| |:|
  Rat    96 ---AGTGAAGGLA----VGGFEWNATFLLLALGWIFVPVYIA-----AGVVTMPQYLKKRFGGQR 148

  Fly   120 MGGLLFLPALCGEVF---------WAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGL 175
            :...:.:.:|...:|         .|..|..|||..|       :.::|||....|: ||:.|||
  Rat   149 IQVYMSVLSLILYIFTKISTDIFSGALFIQMALGWNL-------YLSTVILLVVTAV-YTIAGGL 205

  Fly   176 YSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPKKHWLYID---------- 230
            .:|.|||.:|. .|.:|..:.:.|         |...||.|.    |....||..          
  Rat   206 TAVIYTDALQT-VIMVGGALVLMF---------LGFREVGWY----PGLQQLYRQSIPNVTVPNT 256

  Fly   231 ---------YGLLL--VFGGIPW------------------QVYFQRVLSSKTAGRAQLLSYVAA 266
                     :.:|.  |.|.|||                  ||..||.||:|:...|:       
  Rat   257 TCHLPRSDAFHMLRDPVNGDIPWPGLIFGLTVLATWCWCTDQVIVQRSLSAKSLSHAK------- 314

  Fly   267 AGCIL---MAIPP----VLIGAIAKATPWNETDYKGPYPLTVDETSMI----------------- 307
            .|.:|   :.|.|    |:.|.|::|.          ||   ||.:.:                 
  Rat   315 GGSVLGGYLKILPMFFIVMPGMISRAL----------YP---DEVACVDPDICQRVCGARVGCSN 366

  Fly   308 --LPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMR 370
              .|.::..|.|..:....:..:.||:|||..|...|::::||.:|::.: |::|||.|::.|.|
  Rat   367 IAYPKLVMALMPVGLRGLMIAVIMAALMSSLTSIFNSSSTLFAIDVWQRV-RRQASEQELMVVGR 430

  Fly   371 VAIIVVGILATIMALTIPSIYG-----LWSMCSDLVYVILFP--QLLMVVHFKKHCNTYGSLSAY 428
            :.::   .|..|..|.||.|..     |:.....:...:..|  .|.::..|.|.....|:....
  Rat   431 LFVV---FLVLISILWIPIIQSSNSGQLFDYIQSITSYLAPPITALFLLAIFCKRVTEPGAFWGL 492

  Fly   429 IVALAIRLSGGEAILGLAPLIKY--PGYDEETKE----QMFPFRTMAMLLS-----LVTLIS--- 479
            :..|.:      .||.:.....|  |...|:.:.    :.|.:...|:||.     ::.:||   
  Rat   493 MFGLVV------GILRMILEFSYSAPACGEKDRRPAVLKDFHYLYFALLLCGLTAIIIVIISFFT 551

  Fly   480 ----------VSWWTK 485
                      ::|||:
  Rat   552 EPIPDEKLARLTWWTR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 136/595 (23%)
Slc5a9NP_001382057.1 SLC5-6-like_sbd 48..688 CDD:444915 137/590 (23%)

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