DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a1l1

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001421662.1 Gene:Slc5a1l1 / 365549 RGDID:1563815 Length:695 Species:Rattus norvegicus


Alignment Length:564 Identity:120/564 - (21%)
Similarity:225/564 - (39%) Gaps:133/564 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVLFY-LLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEAIYT 73
            ::.|| ||:|.:|:||......|  :.::..|||:::..::...::.::.||.|:..|.|.....
  Rat    29 VMTFYLLLVLCIGLWALLSHSRG--TIKDFFLAGQNLAWWLMGLSIYSSTVGSGHFMGLAGIGAA 91

  Fly    74 SGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPALCGEVFWAAG 138
            ||:......:.....|...|..|.....|.|.:|:.:.|:..||.....|.|     ..||....
  Rat    92 SGIAVGAFEWNTVFMLFMLGWIFVPIYSKAGVVTLPEYLKKRFGSVRIQLFF-----SFVFLIVY 151

  Fly   139 ILAAL------GAT-LSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMC 196
            ||:.:      ||. |.::.|:|...:::....|...||:.|||.:|||.:.:|...:.:|..:.
  Rat   152 ILSRISMEIGFGAMFLKMVWDIDIYQTMLTVLTITGVYTITGGLATVAYVETLQAGIMVLGSALL 216

  Fly   197 IPFAWSNEHVGSLSDL-------------EVDWIGHVE---PKKHWLYIDYGLLLVFGGIPW--- 242
            :.:|:  ..||...:|             :.:|....|   |::...::...  .|.|.:||   
  Rat   217 MGYAF--YEVGGYQELVNKYSKAIPSTIQQGNWTAKPECYTPREDAFHVFRS--CVSGDVPWPGL 277

  Fly   243 ---------------QVYFQRVLSSKT----AGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPW 288
                           ||..||.|:.|:    .|...|..|:......||.:|    |.|::.   
  Rat   278 VLGATTVSLFYGCADQVSVQRFLAGKSRLHMEGGCLLCGYLKLLPMFLMVMP----GMISRV--- 335

  Fly   289 NETDYKGPYPLTVDETSMILP-------------MVLQY------LTPDFVSFFGLGAVSAAVMS 334
                      |..|:.:.::|             ..|.|      :.|..:..|.|..|.|::||
  Rat   336 ----------LFPDQVACVVPSECEKFCGRGTGCSALAYPVLVLGVMPSGLQGFMLSTVCASLMS 390

  Fly   335 SADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSD 399
            |..|...|::::|..|:|..| |..|:|.|::...|..:|:      ::|:||     :|     
  Rat   391 SLTSIFNSSSALFTLNIYTWI-RPTATEKELMIAGRFFVII------LLAVTI-----VW----- 438

  Fly   400 LVYVILFPQ--LLMVVHFKKHCNTYGSLSAYIVALAIRLSGGE---------AILGLAPLIKYPG 453
            :..:.:.|.  |...:...|.|.|....:.:::|:..:....:         :.:|:..|:....
  Rat   439 IPIIEMAPSETLFEYMQILKSCLTPSVTAVFLLAVFCKRVNEQGAFWGLILGSTIGVFRLLAEFF 503

  Fly   454 YDEET--KEQMFP----------FRTMAMLLSLVTLISVSWWTK 485
            |...|  :::..|          |....:|:|::.::::|..|:
  Rat   504 YGPPTCGEDRQCPIFICGLHYLYFGFCLLLVSILIILAISLATE 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 118/558 (21%)
Slc5a1l1NP_001421662.1 SLC5-6-like_sbd 26..695 CDD:444915 120/564 (21%)

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