Protein Alignment ChT and cho-1

DIOPT Version :10

• Sequence 1: NP_650743.1
• Gene: ChT / 42245
• FlyBaseID: FBgn0038641
• Length: 614
• Species: Drosophila melanogaster
• Sequence 2: NP_502539.1
• Gene: cho-1 / 178274
• WormBaseID: WBGene00000501
• Length: 576
• Species: Caenorhabditis elegans
• Alignment Length: 547
• Identity: 328/547 - (59%)
• Similarity: 401/547 - (73%)
• Gaps: 26/547 - (4%)

  Fly     1 MINIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSE-------EEVMLAGRSIGLFVGIFTMTATW 58
            |.::.|:|:||.||:||||||||||||.:|..:.|       ||||||||:||..||||||||||
 Worm     1 MADLLGIVAIVFFYVLILVVGIWAGRKSKSSKELESEAGAATEEVMLAGRNIGTLVGIFTMTATW 65

  Fly    59 VGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGL 123
            |||.||||||||:|..||:.||||.|||:|||.||:.||..||::||||||||.|..:|:|:|||
 Worm    66 VGGAYINGTAEALYNGGLLGCQAPVGYAISLVMGGLLFAKKMREEGYITMLDPFQHKYGQRIGGL 130

  Fly   124 LFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFC 188
            :::|||.||.||.|.||:|||||||||:.:|...||.||:|||:|||..||.|:||||||:||||
 Worm   131 MYVPALLGETFWTAAILSALGATLSVILGIDMNASVTLSACIAVFYTFTGGYYAVAYTDVVQLFC 195

  Fly   189 IFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEP-KKHWLYIDYGLLLVFGGIPWQVYFQRVLSS 252
            ||:|||:|:|.|..::....:|....||||.:.. |:..|:||..||||||||||||||||||||
 Worm   196 IFVGLWVCVPAAMVHDGAKDISRNAGDWIGEIGGFKETSLWIDCMLLLVFGGIPWQVYFQRVLSS 260

  Fly   253 KTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPY-------PLTVDETSMILPM 310
            |||..||.||:||..|||||||||.||||||:.|.|..||| .|:       .:..|:.:|::|:
 Worm   261 KTAHGAQTLSFVAGVGCILMAIPPALIGAIARNTDWRMTDY-SPWNNGTKVESIPPDKRNMVVPL 324

  Fly   311 VLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIV 375
            |.|||||.:|:|.|||||||||||||||||||||||||.|::||..|..|||.|:|.|||:|||.
 Worm   325 VFQYLTPRWVAFIGLGAVSAAVMSSADSSVLSAASMFAHNIWKLTIRPHASEKEVIIVMRIAIIC 389

  Fly   376 VGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIVALAIRLSGGE 440
            |||:||||||||.||||||.:|:||||||||||||.||:..: .||||||:.|.|.|.:||.|||
 Worm   390 VGIMATIMALTIQSIYGLWYLCADLVYVILFPQLLCVVYMPR-SNTYGSLAGYAVGLVLRLIGGE 453

  Fly   441 AILGLAPLIKYPGYDEETKEQMFPFRTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFRCVVN 505
            .::.|.....||.|.:..  |.|||||.|||.|:.|:..||..::.:|:||:|.|.:|...||||
 Worm   454 PLVSLPAFFHYPMYTDGV--QYFPFRTTAMLSSMATIYIVSIQSEKLFKSGRLSPEWDVMGCVVN 516

  Fly   506 IPEDVQRVGDPSE-----SGEQLSVMA 527
            ||  :..|..||:     |.|.|::.|
 Worm   517 IP--IDHVPLPSDVSFAVSSETLNMKA 541

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ChT	NP_650743.1	SLC5sbd_CHT	7..481	CDD:271368	305/488 (63%)
cho-1	NP_502539.1	SLC5sbd_CHT	7..492	CDD:271368	305/488 (63%)