DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and Slc5a5

DIOPT Version :10

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_443215.2 Gene:Slc5a5 / 114613 RGDID:69267 Length:618 Species:Rattus norvegicus


Alignment Length:505 Identity:105/505 - (20%)
Similarity:194/505 - (38%) Gaps:115/505 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LFYLLILV---VGIWAGRKKQSGNDSEEEVMLAGRSIGLF-VGIFTMTATWVGGGYINGT-AEAI 71
            :|..::||   :|:|.|..: .|..|.::....||.:... ||: ::.|:::....:.|. |||.
  Rat    19 VFATMLLVSTGIGLWVGLAR-GGQRSADDFFTGGRQLAAVPVGL-SLAASFMSAVQVLGVPAEAA 81

  Fly    72 -YTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERM---GGLLFLPA---L 129
             |....:|..|  |..|:.:.....|.....:.|..:....|:..|...:   |.|.:|.|   .
  Rat    82 RYGLKFLWMCA--GQLLNSLLTAFLFLPIFYRLGLTSTYQYLELRFSRAVRLCGTLQYLVATMLY 144

  Fly   130 CGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLW 194
            .|.|.:|..::      |:.:..:|...|::.:..|...||..||:.:|.:|||.|:..:.:|.|
  Rat   145 TGIVIYAPALI------LNQVTGLDIWASLLSTGIICTLYTTVGGMKAVVWTDVFQVVVMLVGFW 203

  Fly   195 M--------------CIPFAWSNEHVGSLSDLEVDWIGHVEPKKHWLYIDYGLLLVFGGIPW--- 242
            :              .:..|.::..: :|.|.:.|      |:..:.:..:   :|.|.:.|   
  Rat   204 VILARGVILLGGPRNMLSLAQNHSRI-NLMDFDPD------PRSRYTFWTF---IVGGTLVWLSM 258

  Fly   243 ----QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPLTVDE 303
                |...||.::..|.|:|:|...|...|..|:.......|.:....      ||...||....
  Rat   259 YGVNQAQVQRYVACHTEGKAKLALLVNQLGLFLIVASAACCGIVMFVY------YKDCDPLLTGR 317

  Fly   304 TS---MILPMVLQYLTPDFVSFFG--LGAVSAAVMSSADSSVLSAASMFARNVY----------K 353
            .|   ..:|:::..:..|.....|  |....:..:|:|.:|:.:.|::...::.          |
  Rat   318 ISAPDQYMPLLVLDIFEDLPGVPGLFLACAYSGTLSTASTSINAMAAVTVEDLIKPRMPGLAPRK 382

  Fly   354 LIFRQKASEMEIIWVMRVAIIVVGILA------------TIMALTIPSIYGLWSMCSDLVYVILF 406
            |:|..|.    :.::...|.:.|..|:            |:|.:....:.|.:::      .:|.
  Rat   383 LVFISKG----LSFIYGSACLTVAALSSLLGGGVLQGSFTVMGVISGPLLGAFTL------GMLL 437

  Fly   407 PQLLMVVHFKKHCNTYGSLSAYIVALAIRL---------SGGEAILGLAP 447
            |.          |||.|.||.....||:.|         ..||..:|:.|
  Rat   438 PA----------CNTPGVLSGLAAGLAVSLWVAVGATLYPPGEQTMGVLP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 105/505 (21%)
Slc5a5NP_443215.2 SLC5sbd_NIS 15..549 CDD:271393 105/505 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..618
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.