DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8064 and CG16896

DIOPT Version :10

Sequence 1:NP_650705.1 Gene:CG8064 / 42196 FlyBaseID:FBgn0038597 Length:922 Species:Drosophila melanogaster
Sequence 2:NP_611973.2 Gene:CG16896 / 37977 FlyBaseID:FBgn0035073 Length:988 Species:Drosophila melanogaster


Alignment Length:861 Identity:172/861 - (19%)
Similarity:289/861 - (33%) Gaps:267/861 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 TIQRAGKGRTVNLVTDPSERVISCHG--TNDLI-----ENFYICTPDEVKK---RLAKRLKKEKK 314
            ||:.||:...:.:..       .|..  :|.|:     .|.::.  |.|:|   ||..|:.|.|.
  Fly   102 TIKEAGQALRIQIAA-------CCFNELSNKLVVIDKRGNVFVF--DFVRKRYWRLGFRMPKAKL 157

  Fly   315 VAED--EGSDEAKLSTEQSLSDEIKRLESIRAKQKIKSIDVVLGQN--QELRVLVSLAN--NSLC 373
            :...  .|||       ..:.::...:.:|.....|..:|..:|..  :||....||.|  :|:.
  Fly   158 IRPSPLHGSD-------YIVGNKTGHIFTIDVDNSILGVDGEVGSAALEELSWSNSLQNARSSIA 215

  Fly   374 LY-----SLEASIKTRKAT-----DPSAKLLRSLTRLGHQSEVRSVCFSNDSLAIGSG------- 421
            |.     :|..::.|.:.:     |.|...|:....|.| |:...:.||||||.:.|.       
  Fly   216 LMRFGSDALLVNLHTLEVSHQLDFDQSRYTLKFAAFLPH-SDQFFIGFSNDSLHVWSSHSLSTLR 279

  Fly   422 AGESFKFWDRDAMQCLRTVPT----------------------------DY----ILCSKFVPGD 454
            .|:..|..:|.    ||.:|.                            |:    :|...|.|..
  Fly   280 MGQPIKARNRK----LRLLPAAESIPEIVLRSPDDSDLEEDLTFDCQHYDFADGMLLSYCFTPDG 340

  Fly   455 RYVLLGMKSGKLLIVDVAAADIVEEIPAHEGELWSIAILPDQKGCVTGSGDTT------------ 507
            ..:.|....|.||::.||:.|:.:.....:..|..:|.|...|..:. .|.||            
  Fly   341 NKMCLSTLDGYLLLLSVASFDLEKMYRLTDFTLHQMAFLSQPKERIV-FGITTRNQAVMLDLANT 404

  Fly   508 -------------------------------VKIW-TFELIDAGEGAAQTKVLSLLHKNTLKLEE 540
                                           |.:| |..:.:|.:  ||.:.||.: |:|.|...
  Fly   405 DHKLIVQRSNARSLSLSRDGKLLSVTSRCGEVNVWSTCRIFNALQ--AQIRCLSQV-KSTFKQPN 466

  Fly   541 TVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLD-----------ISYDSN 594
            .:...:|...:......||:.......|..:..|...|.:.:....||           |...:.
  Fly   467 PLPPCSVGGGVSKELRDLLNPQRLKTMLKEYGCYPEKYRYLIWTSLLDLPCNGPQFQELIKLGAP 531

  Fly   595 LIVTGSAD----RN-------VKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFFTCGKDGKVK 648
            |:|...|.    ||       :|:|......|  .:.||.|      |:|  |:.|..     ||
  Fly   532 LLVRNRAKKLKIRNDHQRRVVIKIWSCLAQWC--KVLAHAD------FMP--HLIFPF-----VK 581

  Fly   649 QWDGDN---FEKILTLP-GHIGEAYCLSVSPNGRYLVTCGS-----DRTLRMFERTDETIVLKD- 703
            :...::   ||.|.||. .|....:.....|...||..|.:     |..|..|.::.| ::.|| 
  Fly   582 RMPKNSLVCFELIATLVLNHFQLCFEFHPLPPSNYLAMCENILQHCDEQLCKFYKSQE-MLPKDF 645

  Fly   704 ----VQEEEREQMENEQLATGEDNTV---PLLPG--------------LKMPSRKTV---GSEQS 744
                :.....|.:|.||..:..||..   |..|.              |::|.:::|   ..:|:
  Fly   646 AWPLLSTAFSEVLEEEQWLSLWDNIFSEPPWFPVFLVVAYNLINREIILRLPDKRSVLFFFHDQN 710

  Fly   745 AESILECLEISKQFELEAEEKPELHP--LMQALQ----------VKNPEDFL-------VSTL-- 788
            ...|.:.|  ||..:|.::....|||  .|....          :|.|.:::       ||.:  
  Fly   711 PVDISKLL--SKARKLMSKCALALHPQRFMTHFSPIPKGVYPKFLKYPSEWIDEQEYQAVSLIKH 773

  Fly   789 -----MRIRASDLEEALLLLPFSTVCEVLERLPTLLTQRPDQLELLCRVTIFLFKVHMKPISAAK 848
                 .|||..:|||.          :::|||.|.|.|......|.....::...:|.:......
  Fly   774 NQEIDARIRHLELEEV----------KIMERLETGLKQEEHARRLKEMERVYQDTIHREEERITC 828

  Fly   849 NMKPLLVKLLSMLKR---------DVGQLRDVLGWNLHGLALLQTEVEQRDGVQLFREATQTRKK 904
            ..|.||...:.:.:|         :..|.|.:|              |....:.|...:.:..::
  Fly   829 QRKMLLTYQMEVRRRKSEVITKLQESEQRRKIL--------------EMEKDMDLLMHSIERERR 879

  Fly   905 RDKKRREASKRRLQIQ 920
            |..:..:.::..::.|
  Fly   880 RHNQEMQLAEDEIRNQ 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8064NP_650705.1 WD40 repeat 69..108 CDD:293791
WD40 72..611 CDD:441893 96/481 (20%)
WD40 repeat 113..149 CDD:293791
WD40 repeat 156..194 CDD:293791
WD40 repeat 200..236 CDD:293791
WD40 repeat 349..398 CDD:293791 14/62 (23%)
WD40 401..693 CDD:238121 82/405 (20%)
WD40 repeat 408..441 CDD:293791 12/39 (31%)
WD40 repeat 446..482 CDD:293791 10/35 (29%)
WD40 repeat 487..535 CDD:293791 16/91 (18%)
WD40 repeat 543..578 CDD:293791 5/34 (15%)
WD40 repeat 584..621 CDD:293791 11/58 (19%)
WD40 repeat 626..662 CDD:293791 10/38 (26%)
WD40 repeat 669..692 CDD:293791 6/27 (22%)
Utp12 780..884 CDD:461125 24/126 (19%)
CG16896NP_611973.2 DUF5401 <754..>987 CDD:375164 29/166 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.