DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg1 and piga

DIOPT Version :10

Sequence 1:NP_650662.1 Gene:Alg1 / 42146 FlyBaseID:FBgn0038552 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001119918.1 Gene:piga / 791759 ZFINID:ZDB-GENE-040426-1086 Length:487 Species:Danio rerio


Alignment Length:432 Identity:85/432 - (19%)
Similarity:136/432 - (31%) Gaps:161/432 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 SIGRPSFLLVQNPPGIPTLIVCYLYCAVTR-TKLAIDWHNYTYTVLALGMSKGEQSPLIRLVRRL 158
            ||...|.....|..|:.:.|.....|.:.: .|:.|..|.|           |::..:..|...|
Zfish    38 SICMVSDFFYPNMGGVESHIYQLSQCLIEKGHKVVIATHAY-----------GDRRGIRYLTNGL 91

  Fly   159 ERYFGSKAHTHFCVTRAMQEDLQQNWGIGPVKVLYDRAPAQ--FHP------------IDLTHKH 209
            :.|:                        .|::|:|:::.:.  ||.            |.:.|.|
Zfish    92 KVYY------------------------LPLQVMYNQSTSTTCFHSLPLLRCIFVRECITIVHAH 132

  Fly   210 ELYLKLAKDYPQFQAKD---------------AEQSDVLEATALTQKLASG----VVQYRPQRQA 255
            ..:..:|.| ..|.||.               |:.|.||....||..|...    .|.|..:...
Zfish   133 SSFSAMAHD-ALFHAKTMGLNTVFTDHSLFGFADLSSVLTNKLLTVSLCDTNHIVCVSYTSKENT 196

  Fly   256 VL---------------VSSTSWTPD------EDFGILLKALQAYEETAQAEPLVYPSL------ 293
            ||               |..|.:|||      ....|::.:...|.:.......:.|.|      
Zfish   197 VLRATLDPEIVSVIPNAVDPTDFTPDPCRRDNSKITIVVISRLVYRKGIDLLSGIIPELCGRHPD 261

  Fly   294 LC-IITGKGPQKEHYVAEI-EKLQWQKVSVITPWLEIEDYPTVLASADL--------GVCL---H 345
            || :|.|:|| |...:.|: ||.|......:...|:.:|...||....:        ..|:   .
Zfish   262 LCFLIGGEGP-KRIILEEVREKYQLHDRVRLLGALDHKDVRDVLVQGHIFLNTSLTEAFCMAIVE 325

  Fly   346 WSTSGLD------------LPMKVVDMFGSGLPVCAYDFKC--LDELVKHGENGFVFGDHVQLAE 396
            .::.||.            ||.::|.:.|..  ||:.   |  |:.::|...:|.|         
Zfish   326 GASCGLQVVSTRVGGIPEVLPNELVTLCGPS--VCSL---CDGLETVIKKIRSGNV--------- 376

  Fly   397 QLRIWFENFPKNPSILETRAGFQRKIQEFQELRWRESWRLIA 438
                            |:.|...||:      |...:||.:|
Zfish   377 ----------------ESPAAIHRKV------RTLYTWRNVA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg1NP_650662.1 GT33_ALG1-like 6..442 CDD:340843 85/432 (20%)
pigaNP_001119918.1 GT4_PIG-A-like 38..437 CDD:340827 85/432 (20%)

Return to query results.
Submit another query.