DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and idc

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_650862.1 Gene:idc / 42393 FlyBaseID:FBgn0038768 Length:521 Species:Drosophila melanogaster


Alignment Length:509 Identity:118/509 - (23%)
Similarity:174/509 - (34%) Gaps:187/509 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CL----EVLAKI------KDLT-------GIWLEQNERQPRHICPSCLNDLNTSIKLKKRIQRVH 74
            ||    |.:|.|      ||||       |:.::|.:..|..||..|...|..:.|.::..||.:
  Fly    26 CLQQPKEPMASIFNDDSEKDLTHMIRECGGVPIKQFDHYPDKICEKCFKVLKMAFKFRETCQRSY 90

  Fly    75 NEATLRRESG-------------------LDEDLESTVSDIEPEGDSSD---------------- 104
            ..  ||:..|                   |:.|::...::.|||.|..|                
  Fly    91 GH--LRQFVGPVEVEQRPPEKKGSETATKLEPDVDPDEAEQEPEHDEEDEDVDLDESHYAEADDA 153

  Fly   105 -------------------LES-----------------EESYD-SENYPFD------------- 119
                               ||.                 ||.|| .|.|..|             
  Fly   154 AETQGGVFHDEIEDGILVELEKDRIVHVKNEQVEEDGIIEEVYDVYETYEGDLIPDQGYDHEMAD 218

  Fly   120 ----------------------KKAEESD--IDLNLAHED------------RRNEPH---NPYD 145
                                  :.|.|.|  :|||...|:            .||...   ||..
  Fly   219 QALSELSAEIEYLDQVEHDQLTESAHEDDAEVDLNSTEEEFVPSKSVRASIHARNATKRRVNPRR 283

  Fly   146 SETPLIFKHKNPLIETPSFANENLPNK-VDAKSP---KKGNFIQIGTDLRLLTTYPSIKVVKPLA 206
            |.|           .|.|.|.|:..:| .|..:|   ::||....|:.:       |||..|.::
  Fly   284 SAT-----------STASVAVESSTSKTTDRGNPLKVRRGNSDSAGSKM-------SIKSEKDIS 330

  Fly   207 LAPEDVAAENVPPAKRTA--------RKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFC 263
            :.  :|.|......|...        :|....:|..||.::.:...|..|:..|:|.|...|..|
  Fly   331 IG--EVLARKHSGIKTKGGHKILLGDKKEFKYICDVCGNMYPSQSRLTEHIKVHSGVKPHECEIC 393

  Fly   264 DKRFVTKYLARLHERVRHM----GEQPFECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKR 324
            ...|     |:..:..|||    |.:|::|::|.|.|...:.::.|.|| |..:..|:||.|.|.
  Fly   394 GHCF-----AQAQQLARHMNTHTGNRPYKCSYCPAAFADLSTRNKHHRI-HTNERPYECDVCHKT 452

  Fly   325 FNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRSHFDSVAHQKRASAILES 378
            |.....|..||.:|:|.||..|.:|...|.:...||:|  .|.|::|..:..||
  Fly   453 FTYTNTLKFHKMIHTGEKPHVCDVCGKGFPQAYKLRNH--RVIHERRGQSARES 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 19/65 (29%)
zf-C2H2 231..252 CDD:395048 5/20 (25%)
C2H2 Zn finger 232..252 CDD:275368 5/19 (26%)
zf-H2C2_2 244..269 CDD:463886 8/24 (33%)
C2H2 Zn finger 260..281 CDD:275368 4/20 (20%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
idcNP_650862.1 zf-AD 22..95 CDD:214871 20/70 (29%)
C2H2 Zn finger 362..382 CDD:275368 5/19 (26%)
COG5048 386..>447 CDD:227381 19/66 (29%)
C2H2 Zn finger 390..410 CDD:275368 7/24 (29%)
C2H2 Zn finger 418..438 CDD:275368 7/20 (35%)
SFP1 <424..491 CDD:227516 24/69 (35%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..494 CDD:275368 7/21 (33%)

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