DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and CG4424

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:360 Identity:98/360 - (27%)
Similarity:135/360 - (37%) Gaps:80/360 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KIKDLTGIWLEQNERQ---PRHICPSCLNDLNTSIKLKKRIQRVHNEATLRR-------ESG-LD 86
            ||:.|:||.:....::   |..||..|...|..:.|.::..|| .|| .||.       |.| :.
  Fly    42 KIESLSGIQIRATAKEEVLPTRICLRCKAFLTLAHKFRQICQR-SNE-FLREYVIKDAVEQGVVK 104

  Fly    87 EDLESTVSDIEPEGDSSDLESEESYDSENYPFDKKAEESDIDLNLAHEDRRNE-PHNPYDSETPL 150
            |.::.|.....|..::..||.         |.|:..||.    ..:.||...| ||.|.:.|.|.
  Fly   105 EVVQQTRPSTPPPIETEQLEP---------PEDEVLEEG----VWSTEDPIEETPHGPAEKERPT 156

  Fly   151 IFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTYPSIKVVKPLALAPEDVAAE 215
            :            ...|.||                                     ||....|.
  Fly   157 V------------LTVEMLP-------------------------------------APYPPPAS 172

  Fly   216 NVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLHERVR 280
            ..|||...|.|.:..||..||..:.....|.|||.||..|:.:.|..|.|.|...|..:.|.| :
  Fly   173 TPPPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIR-Q 236

  Fly   281 HMGEQPFECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFD 345
            |.|.:|:.|.:|...|...|:...||| .|..:..|.|..|.|:|...:.|..|...|:|.||..
  Fly   237 HTGAKPYTCQYCQRNFADRTSLVKHER-THRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHI 300

  Fly   346 CVICQINFARKATLRSHFDSVAH--QKRASAILES 378
            |.:|..:|||...|.:|..:..|  ..|.:|.|.:
  Fly   301 CQLCNKSFARIHNLVAHLQTQQHINDPRLTAYLST 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 13/45 (29%)
zf-C2H2 231..252 CDD:395048 8/20 (40%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:463886 11/24 (46%)
C2H2 Zn finger 260..281 CDD:275368 7/20 (35%)
C2H2 Zn finger 289..308 CDD:275368 6/18 (33%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
C2H2 Zn finger 346..362 CDD:275368 6/15 (40%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 17/51 (33%)
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
COG5048 210..>345 CDD:227381 41/128 (32%)
C2H2 Zn finger 217..237 CDD:275368 7/20 (35%)
C2H2 Zn finger 245..265 CDD:275368 7/20 (35%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)

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