DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and CG6654

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:571 Identity:113/571 - (19%)
Similarity:178/571 - (31%) Gaps:226/571 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LCASCFCHLNPTIIF-------CLEVLAKIKDLTGIWLEQNERQPRHICPSCLNDLNTSIKLKKR 69
            :|.:|.....|.:..       ||..:  |::.|.....:|:..|..:|.|||::::.....|  
  Fly     6 ICLTCLSSTGPLLSIYDGGSGSCLADM--IREFTKTKPRRNDNLPEKVCLSCLSEISNCYTFK-- 66

  Fly    70 IQRVHNEATLRR--ESGLDEDLESTVS---------------DIEPEG----------DSSDLES 107
            |:..::..|||:  .:.|.|:.:|.||               ..||:.          .::|.|.
  Fly    67 IKCENSSRTLRQLLPNALPEEPDSKVSISCPVATTDQAVQTTSWEPDRCTASVQTDAVTTTDAEQ 131

  Fly   108 EES-----------YDSENYPFDKKAEESDID-----------------------LNLAHEDRRN 138
            ..|           |:.|...||.:..:..::                       .|:.:|...:
  Fly   132 NTSLIKSTISVDLDYEGEGEVFDYELPDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDH 196

  Fly   139 EPHNP-----------YDSETPLIF----------------------KHKNPL---IETPSFANE 167
            |....           .|:|..:|.                      ||:.|:   .|......|
  Fly   197 ELEQQIRECNLAIFEGVDNEAEIITVTAPQVTTRKSAAKLLTQQENDKHQTPVGSKEEARELEKE 261

  Fly   168 NLPNKVDAKSPKKGNFIQ------------------IGTDLRL----------------LTTYPS 198
            .:|......|.::|...|                  :||..:|                ..|.|.
  Fly   262 QVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPE 326

  Fly   199 IK-----------VVKPLAL----------------------APEDVA-------AENVPPA--- 220
            :|           |.|.|.:                      :|:.:|       |.|.|..   
  Fly   327 LKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGAHNCPECGIR 391

  Fly   221 ---------------KRTARKM------------------------QSLVCPKCGRVFKTPYNLK 246
                           ||..|..                        :..||..||:.|....||:
  Fly   392 CDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLR 456

  Fly   247 THMVRHTGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATFFTSTAKSSHERIRHI 311
            .|.:||:..|:|.|..|...||||.....|.|. |.|::||||..|.|.|.||.:.:.|:| :|.
  Fly   457 QHKLRHSETKSFKCELCPHSFVTKAELTSHART-HTGDKPFECEVCLARFTTSCSLAKHKR-KHT 519

  Fly   312 RDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRSH 362
            .:..|.||.|..||.....|..|:..|:|.:|:.|..|...|.::...:.|
  Fly   520 GERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMH 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 15/70 (21%)
zf-C2H2 231..252 CDD:395048 8/20 (40%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:463886 10/24 (42%)
C2H2 Zn finger 260..281 CDD:275368 8/20 (40%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 3/15 (20%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871 17/75 (23%)
C2H2 Zn finger 331..354 CDD:275368 3/22 (14%)
COG5048 <357..570 CDD:227381 56/214 (26%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
C2H2 Zn finger 385..406 CDD:275370 1/20 (5%)
C2H2 Zn finger 414..434 CDD:275368 0/19 (0%)
C2H2 Zn finger 442..490 CDD:275368 19/48 (40%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
C2H2 Zn finger 498..518 CDD:275368 8/20 (40%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
C2H2 Zn finger 554..574 CDD:275368 4/17 (24%)
C2H2 Zn finger 582..602 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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