DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and cg

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:170 Identity:52/170 - (30%)
Similarity:85/170 - (50%) Gaps:7/170 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 PSIKVVKP--LALAPEDVAAENV--PPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKN 257
            |::| ::|  |.|:|:....|::  .....|.:|.:...|.:||:.|...::|.||...||||:.
  Fly   256 PNLK-LEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHARVHTGERP 319

  Fly   258 FPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCT 322
            ..||.|.|.|..|:....| .:.|..|:|::|..|..:|.......:|.|: |.|:..:.|.:|.
  Fly   320 HICTHCGKSFAHKHCLNTH-LLLHSTERPYQCQECKKSFTLKHHLLTHSRV-HSRERPFVCQECG 382

  Fly   323 KRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRSH 362
            :.|..|..|..|...|:|.:|:.|..|..:||::..|..|
  Fly   383 RAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMH 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048 7/20 (35%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:463886 12/24 (50%)
C2H2 Zn finger 260..281 CDD:275368 7/20 (35%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
cgNP_001097306.2 COG5048 287..>371 CDD:227381 27/85 (32%)
C2H2 Zn finger 294..314 CDD:275368 7/19 (37%)
zf-H2C2_2 306..331 CDD:463886 12/24 (50%)
C2H2 Zn finger 322..342 CDD:275368 7/20 (35%)
C2H2 Zn finger 350..370 CDD:275368 5/20 (25%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 6/17 (35%)
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 461..482 CDD:275368
C2H2 Zn finger 490..509 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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