DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and CG15269

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_609739.2 Gene:CG15269 / 34887 FlyBaseID:FBgn0028878 Length:587 Species:Drosophila melanogaster


Alignment Length:133 Identity:45/133 - (33%)
Similarity:66/133 - (49%) Gaps:2/133 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 CPKCGRVFKTPYNLKTHMVRHTGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATF 296
            ||:||:.|.....|.:|:..|...|.:.|.:|.|.|..:....:|.|: |.|.:|.:||.|...|
  Fly   357 CPECGKTFNDKGYLSSHLKIHRNRKEYECPYCPKSFNQRVAFNMHVRI-HTGVKPHKCNECGKRF 420

  Fly   297 FTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRS 361
            ........|.| .|..:..|||..|.|.|..::.:..|..||||:|||.|.:|...|.:|..|::
  Fly   421 SRKMLLKQHMR-THSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKT 484

  Fly   362 HFD 364
            |.:
  Fly   485 HLN 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048 7/19 (37%)
C2H2 Zn finger 232..252 CDD:275368 7/19 (37%)
zf-H2C2_2 244..269 CDD:463886 8/24 (33%)
C2H2 Zn finger 260..281 CDD:275368 6/20 (30%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 318..338 CDD:275368 5/19 (26%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
CG15269NP_609739.2 C2H2 Zn finger 300..320 CDD:275368
C2H2 Zn finger 327..347 CDD:275368
C2H2 Zn finger 357..377 CDD:275368 7/19 (37%)
COG5048 <370..515 CDD:227381 40/120 (33%)
C2H2 Zn finger 385..405 CDD:275368 6/20 (30%)
C2H2 Zn finger 413..433 CDD:275368 6/20 (30%)
C2H2 Zn finger 441..461 CDD:275368 5/19 (26%)
C2H2 Zn finger 469..489 CDD:275368 6/19 (32%)
C2H2 Zn finger 497..515 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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