DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and CG44002

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:372 Identity:88/372 - (23%)
Similarity:145/372 - (38%) Gaps:61/372 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SQCHLCASCFCHLNPTIIF------CLEVLAKIKDLTGIWLEQNERQPRHICPSCLNDLNTSIKL 66
            ::|.:|.:  ...|...||      .:.:...|.:.||..:|:.:..|..|||.|:.|.:.:..:
  Fly     3 NKCRVCLA--SSKNMVNIFEERQDLPVSIAHMIIECTGFKVEKGDSLPHSICPPCVKDAHNAFTI 65

  Fly    67 KKRIQRVHNEATLRRESGLDEDLESTVSDIEPEGDSSDLESEESYDSENYPFDKKAEESDIDLNL 131
            .|..:|.:......:::.|:|:|            |.|:..|.|...|....|::.|:       
  Fly    66 IKTYERSYQVFYEVQDTVLEEEL------------SEDVIIELSDSDEVILIDEQEEK------- 111

  Fly   132 AHEDRRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLLTTY 196
            .|......|.|...::.           |:.:..::|:       |..||:   |.|...:....
  Fly   112 VHLSENKAPTNEVSTQE-----------ESKTAQSDNV-------SEDKGH---ICTQCHMSFRR 155

  Fly   197 PSIKVV-----------KPLALAPEDVAAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMV 250
            |.:..:           :|::...|....|.:....|...:..:..|..|.:.|.:..:...|..
  Fly   156 PGLLELHILRHHTTDGPRPMSSTSEHAVKEELRTKARQLSRNSTHTCRLCNKTFCSKASCVRHQK 220

  Fly   251 RHTGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATFFTSTAKSSHERIRHIRDLR 315
            .|||||.|.|..|.|.|......:.|.|. |.||:||:|..|.:.|...:|...|.|| |..:..
  Fly   221 THTGEKPFACEICQKPFADLASVKRHLRT-HTGERPFKCLTCQSAFSDGSALRQHIRI-HTGERP 283

  Fly   316 YQCDQCTKRFNTKTCLNKHKFLHSGLKPFDCVICQINFARKATLRSH 362
            |:||.|.|.|..::...||...|:..|.|.|..|:..|.:...||.|
  Fly   284 YKCDMCDKFFRERSDARKHMMSHTAEKRFKCSQCERRFRQPKGLRRH 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 17/72 (24%)
zf-C2H2 231..252 CDD:395048 4/20 (20%)
C2H2 Zn finger 232..252 CDD:275368 4/19 (21%)
zf-H2C2_2 244..269 CDD:463886 11/24 (46%)
C2H2 Zn finger 260..281 CDD:275368 6/20 (30%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 17/71 (24%)
C2H2 Zn finger 146..166 CDD:275368 2/19 (11%)
COG5048 <162..302 CDD:227381 39/141 (28%)
C2H2 Zn finger 202..222 CDD:275368 4/19 (21%)
C2H2 Zn finger 230..250 CDD:275368 6/20 (30%)
C2H2 Zn finger 258..278 CDD:275368 7/20 (35%)
SUF4-like 282..>342 CDD:411020 17/49 (35%)
C2H2 Zn finger 286..311 CDD:411020 8/24 (33%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..335 CDD:411020 6/17 (35%)
C2H2 Zn finger 314..333 CDD:275368 6/17 (35%)

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