DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17801 and ztf-30

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_498892.1 Gene:ztf-30 / 182317 WormBaseID:WBGene00015523 Length:397 Species:Caenorhabditis elegans


Alignment Length:83 Identity:23/83 - (27%)
Similarity:35/83 - (42%) Gaps:3/83 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 FECNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKHKF-LHSGLKPFDCVICQ 350
            |.|:.||..|..|::.|.|....|.:.  |:|..|.|..::...|..|.| .|...:.:.|..|.
 Worm    51 FRCSICSKVFCHSSSLSRHRMQAHFKS--YKCTVCRKDISSSESLRTHMFKQHHISRMYMCRCCN 113

  Fly   351 INFARKATLRSHFDSVAH 368
            ..|..|:.|..|..:..:
 Worm   114 WAFPDKSLLHIHLQTATN 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048
C2H2 Zn finger 232..252 CDD:275368
zf-H2C2_2 244..269 CDD:463886
C2H2 Zn finger 260..281 CDD:275368
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 318..338 CDD:275368 6/20 (30%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
ztf-30NP_498892.1 PHA00733 <51..103 CDD:177301 17/53 (32%)
C2H2 Zn finger 53..74 CDD:275368 7/20 (35%)
C2H2 Zn finger 80..101 CDD:275368 6/20 (30%)
C2H2 Zn finger 109..128 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.