DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17801 and znf853

DIOPT Version :10

Sequence 1:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_031748869.1 Gene:znf853 / 100487314 XenbaseID:XB-GENE-6031115 Length:604 Species:Xenopus tropicalis


Alignment Length:419 Identity:98/419 - (23%)
Similarity:153/419 - (36%) Gaps:114/419 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TIIFCLEVLAKIKDLTGIW--LEQNERQPRHICPSCLNDLNTSIKLKKRIQRVHNEATLRRESGL 85
            :|.|.||....||....:.  :.:.|.:|:.:||.                  ..|...:||  :
 Frog   118 SIYFSLEEWEYIKGNQALLRKIMKEEEEPQQVCPP------------------DGEYEDKRE--I 162

  Fly    86 DEDLESTV------SDIEPEGD----SSDLESEESYDSENYP---FDKKAEESDIDLNLAHEDRR 137
            ..||..|:      |.|..||.    ..:|.:.|...:|..|   ..|:...||..:|...|..:
 Frog   163 PADLGGTLCYNNEPSKIGAEGADFCVDGELRNPEISPAEQPPPANGIKEEAASDCSINPLTEQIQ 227

  Fly   138 NEPHNPYDSETPLI---------FKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIGTDLRLL 193
            ..     |:.||::         ..:::.:|:....::|. .|:.|.....:   || |||    
 Frog   228 GT-----DTPTPIMGCSLNNNSAEDYRSVVIKEEESSSEG-ENQSDCSINSQ---IQ-GTD---- 278

  Fly   194 TTYPSIKVVKPLALAPEDVAAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTGEKNF 258
            |..|:.:....................::|...::..||..|.:.||....|..|...|||||.|
 Frog   279 TPTPNTETYNCSECHKRCKTKAGFLKHQKTHTGVKPFVCSVCEKPFKYQSKLNLHKRSHTGEKPF 343

  Fly   259 PCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATF--------------------------- 296
            .|:.|.||| |:::..:.....|.||:|:.|:.|...|                           
 Frog   344 SCSECGKRF-TRHVHLIEHHRTHTGEKPYSCSDCGKHFSHSSDFYRHCRIHRLEKLCICSQCNKQ 407

  Fly   297 FTSTA-----KSSH------------------ERIR-HIR----DLRYQCDQCTKRFNTKTCLNK 333
            |||.:     :|||                  .::: |:|    :..|.|.:|.|.|...:.|..
 Frog   408 FTSHSELIVHQSSHVGRGQYPCSECGKHFVSTSQLKIHLRVHSVERPYSCSECGKCFKYSSYLTV 472

  Fly   334 HKFLHSGLKPFDCVICQINFARKATLRSH 362
            ||.:|:|.|||.|..|...|..:|.|.||
 Frog   473 HKRIHTGEKPFTCTECGKGFIDRAYLNSH 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 10/54 (19%)
zf-C2H2 231..252 CDD:395048 7/20 (35%)
C2H2 Zn finger 232..252 CDD:275368 6/19 (32%)
zf-H2C2_2 244..269 CDD:463886 13/24 (54%)
C2H2 Zn finger 260..281 CDD:275368 6/20 (30%)
C2H2 Zn finger 289..308 CDD:275368 9/68 (13%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
C2H2 Zn finger 346..362 CDD:275368 5/15 (33%)
znf853XP_031748869.1 KRAB_A-box 112..145 CDD:470626 7/26 (27%)
COG5048 <265..502 CDD:227381 63/246 (26%)
C2H2 Zn finger 289..309 CDD:275368 0/19 (0%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
C2H2 Zn finger 345..365 CDD:275368 6/20 (30%)
C2H2 Zn finger 373..393 CDD:275368 3/19 (16%)
C2H2 Zn finger 401..421 CDD:275368 4/19 (21%)
C2H2 Zn finger 429..449 CDD:275368 2/19 (11%)
C2H2 Zn finger 457..477 CDD:275368 7/19 (37%)
C2H2 Zn finger 485..505 CDD:275368 7/17 (41%)
zf-H2C2_2 497..521 CDD:463886 3/5 (60%)
C2H2 Zn finger 513..533 CDD:275368
zf-H2C2_2 525..550 CDD:463886
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 553..576 CDD:463886
C2H2 Zn finger 569..589 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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