DRSC/TRiP Functional Genomics Resources

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Protein Alignment pasi1 and CG13288

DIOPT Version :10

Sequence 1:NP_650655.1 Gene:pasi1 / 42139 FlyBaseID:FBgn0038545 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001261455.1 Gene:CG13288 / 38665 FlyBaseID:FBgn0035648 Length:273 Species:Drosophila melanogaster


Alignment Length:181 Identity:52/181 - (28%)
Similarity:79/181 - (43%) Gaps:44/181 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVVLSSCWSPIIWSDNVRTGSYAVAGYTA---ALSAVMITLISYM------LAGGESAQLYSPLF 56
            |.:|.||   ..|.| ||:||:|.|.||.   ..|.:|  .:.|:      |.|..:..|...|.
  Fly     1 MAILESC---CFWKD-VRSGSFACAIYTLVYFGFSTLM--FLFYLIEEQDFLLGNRAQPLGESLL 59

  Fly    57 ETDIRSSMPVAGGFFIIYFL----LIILSSYLVYYGIKISTRGWLLPWLG------------LIG 105
            |   :..:.|....|.|..|    |::|||.|:..|::.:.|..|:||:.            |:.
  Fly    60 E---KGDVTVVTVIFNILLLFCSILMVLSSVLLILGLQQNKRHLLIPWISFMLGDLLIEVCHLVH 121

  Fly   106 LAILFQFSWSLWLIGGYYIYLEQTFSALLNFVWVAYNIYCWLVVFSQYQIF 156
            ||:..:..:.. ::|         |...::|..:..|:||.|.|.||||.|
  Fly   122 LALSRRVKFDP-IVG---------FIFTMDFFLLCLNLYCLLCVISQYQTF 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pasi1NP_650655.1 None
CG13288NP_001261455.1 DUF4728 75..163 CDD:374176 27/98 (28%)

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