DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS11 and mrps-11

DIOPT Version :10

Sequence 1:NP_524382.1 Gene:mRpS11 / 42061 FlyBaseID:FBgn0038474 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_506131.1 Gene:mrps-11 / 179711 WormBaseID:WBGene00012244 Length:208 Species:Caenorhabditis elegans


Alignment Length:197 Identity:72/197 - (36%)
Similarity:108/197 - (54%) Gaps:25/197 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IHTSACWRKAEDRKEMLASLPAKD--------------------EGTVGEKTVDIDTLINRKA-- 68
            :.|::...:.:..:.:.||:.|.|                    |||.|   ..|.|.:|..:  
 Worm    15 LQTASQSMEIQQNRAIHASIRAADSIRDAHRQGTRIGTGQVETMEGTTG---AGIQTAVNTSSID 76

  Fly    69 KFFPDASTANTLFNGIPFNELPICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTRKGTNIA 133
            ...|.|.|....|:|:.::|||:..||.|.|||:::|.|:|..:....||.:|||||.||.|.||
 Worm    77 ARLPTAETLKQQFDGVAYHELPLVYIRASKNNTLVTVMDNKNEVITSTSCRLEGFKNARKKTTIA 141

  Fly   134 AQATAVTISGKAIELGWKTVRVKVRGLGPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
            .|.|.|....:.:..|.:||||:|:|||||||:.:|||.:.|:::|||:|:|.:....|||||.|
 Worm   142 GQTTGVAAGQRLVRRGIRTVRVQVKGLGPGRMTCVKGLTVAGVHVVSISDHTPLCELGPRPRKIR 206

  Fly   199 SL 200
            .:
 Worm   207 RI 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS11NP_524382.1 RpsK 91..198 CDD:439870 51/106 (48%)
mrps-11NP_506131.1 Ribosomal_S11 100..208 CDD:444843 52/107 (49%)

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